Vigna umbellata (ricebean): 124843862
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Entry
124843862 CDS
T09662
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03015
mRNA surveillance pathway
vum04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124843862
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124843862
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vum01009
]
124843862
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124843862
03036 Chromosome and associated proteins [BR:
vum03036
]
124843862
Protein phosphatases and associated proteins [BR:
vum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124843862
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124843862
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124843862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
124843862
NCBI-ProteinID:
XP_047176656
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MNGSDEVVPAAAGPPHPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGG
RVVLFERTDTKDHGASRRDLERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCLTANGALFLLSTNDKTIKFWKVQEKKVKKISEMNIDLSKSMGNGCIASSSNSSSSR
PYLANGGSPDRSYNYISNDFSFPPGGIPSLRLPMVVSSHESSLVARCRRVYAHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNM
LAYSSSKGSIRLVDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYIL
SRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGS
YSNLFRVFGCAPGSAEATTLEASKNPMRRQVPTPSRPSRSLGNSLTRVVRRGAEAPGVDA
NRNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaagcgatgaggtcgtgccagctgcggcgggtccaccgcatcctctggactgg
aaattctcgcaggtcttcggcgaacgcacggcaggggaagaggttcaggaagtggacata
atttctgctattgaatttgacaagtctggtgatcaccttgctactggtgatcggggtggt
cgggtggttctctttgagagaacagatacaaaagatcatggtgcatcaagaagggatttg
gagaggatggactattctattagtaggcatcctgagttccggtacaaaacagagtttcag
agccacgaacctgagtttgactatcttaagagtttggagattgaagaaaagatcaacaaa
atcagatggtgcctaacagctaacggggccctcttccttctctctacaaatgataagact
atcaaattttggaaggttcaagaaaagaaggtaaaaaaaatttctgagatgaatattgac
ctttcaaaatcaatggggaatggatgtattgctagttcaagcaattcaagtagctctagg
ccatatcttgcaaatggaggatctccggatagatcttacaattatataagcaatgacttt
tcatttccaccaggaggcattccttcactgagattacccatggtagtaagtagccatgaa
agcagcctagttgctcgatgtcgtagagtgtatgcacatgctcatgattatcatatcaat
tctatttcaaataacagtgatggcgaaactttcatatctgccgatgatttgcgaataaac
ctttggaacctggaaattagctctcaaagttttaatattgttgatgtaaagcctgcaaat
atggaggatctgacagaggttataacatcagcagaatttcaccctacacattgcaatatg
ttggcttatagcagttcaaagggttcgatccgacttgttgacttgagacaatcggcatta
tgtgattctcattccaaactatttgaggaacaggaagccccagggtcaagatcatttttc
acagagattattgcttctatatcagacataaaatttgggaaggatggaagatacatactt
agtcgtgattacatgactttaaagttatgggacattaatatggattcaggccccgttgca
actttccaagttcacgagtatttaagacccaagctttgtgatttatatgaaaatgattca
atttttgacaagttcgagtgttgtctgagtggtgatggattgcgtgtagccactggttct
tacagcaatctcttccgtgtgtttggttgtgcccctggaagtgctgaggcgacaactcta
gaagccagtaaaaacccgatgagacgacaagttccaaccccttcaaggccttctagatca
ctgggaaatagtttaacacgtgttgtaagacgaggagcagaagcccctggtgtggatgct
aataggaattcatttgacttcacaacaaagttgctgcacttagcatggcatccgagtgag
aattcaattgcttgtgctgctgcaaatagcttgtacatgtactatgcgtaa
DBGET
integrated database retrieval system
