Vigna umbellata (ricebean): 124843880
Help
Entry
124843880 CDS
T09662
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124843880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124843880
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124843880
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124843880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
DUF5965
Motif
Other DBs
NCBI-GeneID:
124843880
NCBI-ProteinID:
XP_047176673
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPREKAKSETRDWLNNVVGELESQIDNFEAELEGISSKKGKNKPPRLIHLETSITRHKA
HVKKCEFILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFEEFSDVDELYSSLPLDKVES
LEDIVTIPPGLAKVAPVLSLKPLPTSASASQTSEQADDTASQDSNSDVGARTPPPKSSTV
SSTATTPAATPVANFATPVSINVTVPNLSSPPPISSLTPGSNSLRSSLEISSAVNASFVN
QSSTVKEDEINSFPVRRPSPSLSDVALIRNISRNSLSNQTTNNIPVVSGNMVSSNGPLGL
VSSTSEITKRNILVADDRLGSNGMVPTLVSPLSNRMIIPQVARGTDGTSSVDSSNANEGA
TLSGRVFSPSAIPGMQWRPGSPFQNQNDMVHFCS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgagtcggaaactccagggcgagattgaccgtgttctgaagaaggttcaggaa
ggcgtcgaagtctttgatagcatctggaacaaggtttacgacacggacaatgcgaaccag
aaggagaagttcgaggctgacctgaagaaggagattaagaagctgcagagatacagggac
cagattaagacttggattcaatccagtgaaatcaaagataagaaggttagtgcctcgtat
gagcaggctttggtggatgcacgcaagcttattgagcgtgaaatggaaagattcaagatc
tgtgagaaggagacaaagacaaaagcattctctaaagaaggcttaggtcaacagcccaaa
actgatcctagagagaaggctaaatcggagacaagggattggttgaacaatgtggttggg
gaattagaatctcagatcgataactttgaagctgagcttgaaggaatttcttcaaagaaa
ggaaagaacaagccacccagattgatacatctagaaacatcaatcactcggcacaaggct
catgtaaagaaatgtgaatttatcttgaggctacttgataatgatgaactaagtccagag
caggtgaatgatgtcaaagatttcttggatgactatgtagaacgtaatcaggaggacttt
gaagaatttagtgatgttgatgagctatatagttcattacccctagataaggtggagtca
cttgaagatattgtaacaattccccctggtcttgctaaggtggcacctgttcttagcttg
aagcctttgccaacatcagcttcagcatcacaaacatctgagcaagctgatgatacagct
tctcaggatagcaattctgatgttggtgcaagaactccacctcctaaaagtagtacagtt
agttctactgcgacaacaccagcggcaacaccagtggcgaattttgctactcctgtttct
ataaatgttacggtgcctaacttgtcaagtccgccgcccatttcatctctcacacctggt
tcaaattctcttcggagttccttggaaattagtagtgctgtcaatgcttcatttgtaaat
cagtctagcactgtgaaagaagatgagattaatagtttccctgtccgaagaccatctcca
tcactttctgatgttgcactcataaggaatatcagcagaaacagcctgtcaaatcaaaca
acaaataacatacctgttgtatctgggaacatggtttccagcaatgggccccttggttta
gtttcttcaacttctgaaataaccaagagaaacatattggttgctgatgatagactcgga
agcaatgggatggtaccaactcttgtatcccctttaagtaatagaatgattattcctcag
gttgcaaggggtactgatggaacttcctcagttgactctagtaatgccaatgaaggtgca
actttgtctgggagagttttctccccttctgctattcctggcatgcaatggagacctgga
agccccttccagaatcaaaatgacatggtacacttttgctcttaa
DBGET
integrated database retrieval system
