Vigna umbellata (ricebean): 124843890
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Entry
124843890 CDS
T09662
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124843890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124843890
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124843890
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
124843890
NCBI-ProteinID:
XP_047176682
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MRPKLAYSFPEEVLEHVFSFIECDKDRGSISLVCKSWYEIERWCRRRVFVGNCYAVSPAT
VVNRFPKVRSITIKGKPHFADFNLVPEGWGAYVGPWIKAMAAAYPWLQEIRLKRMVVTDE
CLELIAKSFKNFGVLVLTSCEGFTTDGLAAIAAHCRNLRELELRESEVEDICGHWLSHFP
DSYTSLVSLNISCLGNEVNLSALERLVSRCPNLQTLRLNRAVPLDKLANLLRGAPQLVEL
GTGAYTSEMRPEVFSNLAEAFAGCRQLKSLSGFWDVLPSYLPAVYPICSNLTSLNMSYAT
IQSPDLIKLVSQCENLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLEPNVALT
EQGLVSVSEGCSKLQSVLYFCRQMSNVALFTIARNRPNMTRFRLCIIEPQVPDYLTQDPL
DAGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGC
DNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPMLNVEVIDE
RGPPDSRPDSSPVEKLYIYRTVSGPRLDMPGYVWRMEGDSALRIS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccaaactagcctactccttccctgaggaggtgctggagcacgtgttctccttt
atcgagtgcgataaagaccgtggctcgatctccctcgtctgcaagtcctggtatgagatc
gagcgttggtgccgccggagagtcttcgtcggaaactgctacgctgtctctccggccacc
gttgtcaaccgcttccccaaagtgagatccatcaccatcaagggcaagccgcacttcgcg
gacttcaatttggtccccgagggttggggcgcttacgtcggcccttggatcaaggccatg
gcggctgcctacccctggctccaggagatcaggcttaagaggatggtcgtcaccgacgaa
tgcttggaacttatcgccaaatcgttcaagaacttcggagtgctggtgctcacttcttgc
gagggtttcaccactgatgggcttgctgccattgccgcccattgcaggaatttgagggag
ttggagttgcgggagagtgaagtggaagacatttgtggacactggcttagccattttccc
gattcgtacacatccttggtttcccttaatatttcttgcttaggcaatgaggtgaatttg
tctgccctagagcgtctggttagtaggtgtcccaatctgcagactctccgcctcaaccgt
gctgtgcccctagataagctggccaaccttcttcgcggagctcctcagttagttgagtta
ggcacaggagcctacacgagtgagatgcggccggaggtcttttcaaacctggctgaagca
tttgctgggtgcaggcaattgaaaagcttgtcaggattttgggacgtgctaccctcctac
cttccagctgtttatcctatctgctccaacctgacatcactaaacatgagttatgcaact
attcaaagccctgatcttatcaagcttgttagtcagtgtgaaaatttacaacggttatgg
gtgctggattacattgaagatgctggccttgaagtgattgctgcatcgtgtaaggatctg
agggagttgagggtgtttccgtctgatccatttgggttagaaccaaatgtggcattgact
gagcagggccttgtttctgtgtctgaaggctgctccaagctccagtccgttctatatttt
tgtcgtcaaatgtctaatgtggccttgtttacaattgccaggaacaggcctaatatgact
cgttttagactgtgtattattgagccgcaagttccagactatcttacccaagatcctctg
gatgctggttttggagctattgtagagcattgcaaggatcttcgtcgcctttccctttcc
gggcttctcactgaccgcgtttttgagtatattgggacttacggtaagaagcttgagatg
ctttctgtggcttttgccggagatagcgatttgggactccatcatgtgctgtctgggtgt
gacaaccttaggaagctggagatcagggactgcccctttggtgacaaagcccttttagcc
aatgctgcaaagctggagacaatgcgatccctttggatgtcctcttgcttggtgagttat
ggagcatgtaaacttctgggtcagaaaatgccgatgcttaatgttgaagtgattgatgaa
agaggacctccagattcaaggccggatagtagtcctgttgagaagctatacatatacagg
actgtttctgggccaagattggacatgccaggctatgtatggagaatggaaggcgattct
gcattaagaatttcttga
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