Vigna umbellata (ricebean): 124844212
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Entry
124844212 CDS
T09662
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic-like
KO
K02945
small subunit ribosomal protein S1
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
124844212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vum03011
]
124844212
Ribosome [BR:
vum03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
124844212
Bacteria
124844212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
124844212
NCBI-ProteinID:
XP_047177056
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MPFILHPSKFLCFPNCTTIPVKDTTLLANTFVKKPNTIPSKHQKFRSFAKITLSSPRASI
VSKKDSILGYTHFTICSRSDGFGGYSTDVSQEAIDDETTAQELEKLELLNKPSPVLVTEE
PSSESSEVEVEQQEKPSEEEALAPFLKFFKGKNSGEDDEEEREGLEVENEEGDKKVNVEY
YDPKLGDFVVGVVVSGNENKLDVNIGADLLGTMLTKEVLPLYDKEMESLLCDVNRDAEDF
MVQGKMGIVKNEEAISGVAVAGRPVVEIGTVLFAEVLGRTFSGRPLLSTRRLFRRIAWHR
LRQIKQLNDPIEVRITEWNTGGLLTRIEGLRAFLPKAELVKKATSFTELKEHVGRRMYVQ
ITQIDETKNNLILSEKEAWEKLNLREGTLLDGTVKKILPYGAQIKLGKSNRSGLLHVSNI
SRAEITSVSDVLSVDENVKVLVMRSMFPDKIALSIAELENEPGLFLSNKERVYLEADMMA
KKYKQKLPPSVE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgccatttattcttcatccttctaaatttctttgctttcccaactgcacaacaatacca
gttaaggacaccactcttttggccaacaccttcgtcaagaaaccaaacaccattcccagt
aagcaccaaaaatttcgttcttttgctaagattactctttccagtccccgtgcatccata
gtttctaagaaagattcaattttgggttatacccacttcacaatttgctccaggagtgat
gggtttggtggatattccactgatgtgtctcaagaggctatcgatgatgaaaccaccgct
caagaacttgagaagcttgagttactaaacaagccttctcctgtgcttgttacagaagag
ccttcatctgaatcgtctgaagttgaagtggaacagcaagaaaagccctcggaagaggag
gctttggcacctttcttgaagtttttcaaaggtaaaaattccggggaggatgacgaggaa
gagagggaggggttggaggttgagaatgaagagggagataagaaggttaatgttgagtac
tatgacccaaaacttggagattttgtggtgggtgttgttgtttcaggtaatgaaaacaag
cttgatgtcaatataggggcagacttgctaggtacaatgttgaccaaggaagtgcttccc
ttatacgataaggaaatggagagcttgttgtgtgatgtgaacagggatgccgaggatttc
atggttcaggggaagatgggaattgtgaagaatgaggaggcaataagtggagtagcagtg
gccggaaggcctgttgtggaaattggaaccgttttgtttgctgaggttttaggtaggaca
tttagtggccgaccattactttccaccagaagactctttcgccggattgcctggcatcga
ctgaggcagataaaacagctcaatgatcctatagaggttagaatcaccgagtggaatact
gggggcctgctaacaaggattgagggtttgcgagctttcctacccaaagctgagcttgta
aaaaaagcaactagctttacagaattgaaagaacatgtggggcgccgcatgtatgtacaa
attactcagatagatgaaactaaaaacaatttaatacttagtgaaaaggaagcttgggaa
aaattgaatcttcgtgagggaacacttctagatgggactgtgaaaaagatcttaccgtat
ggagcccaaattaagctaggaaaaagtaacagaagtgggttgctgcatgtttcaaatatc
tctagagctgaaattacttctgtcagtgacgtactatctgttgatgagaatgtcaaagtt
cttgttatgaggtcaatgtttcctgataaaattgctttaagcattgctgaacttgaaaat
gaacctggcctttttctatcaaataaagagagagtttatctggaggctgatatgatggca
aagaaatacaagcaaaagctacctccttctgtcgaa
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