Vigna umbellata (ricebean): 124844925
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Entry
124844925 CDS
T09662
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124844925
Enzymes [BR:
vum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124844925
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124844925
NCBI-ProteinID:
XP_047177899
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MAIGKNFFVLFYLAVLIPTLNANPLEDDQYWKNHENEFDTYWKDRAQKAAEDNKAAYFED
PYSVSGNFTSSVSELIVGKDTRRSLKGKNGDGGPCMATNPIDRCWRCDPNWANNRQKLAD
CVQGFGRNTVGGKGGPIYVVTDPSDDNMVDLKPGTLRHAVTRNGPLWIIFERNMIIHLKQ
ELIMTSNKTIDGRGVDVYISNGAGITIQFIKNVIIHGIKVYDISVHGGGLIRDSETHYGL
RTQSDGDGISIFGSSNIWIDHVSMRNCYDGLIDAIMGSTAITISNSHFTDHNEAMLFGAS
DSYDADKIMQITLAFNHFGKRLIQRMPRCRHGFFHVVNNDYTHWEMYAIGGSMNPTIISE
GNRFIGPDNIYAKEITKREYSPENVWKQWQWRSINDEYMNGAFFVQSGPELVNRPFSRLD
MIKAKPGSYVGRLTRYSGSLKCRVGFPC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcggaaagaacttttttgttctgttttatttggcagtcttaatccctaccctg
aatgccaatcccttggaggatgatcagtattggaagaaccatgaaaacgagtttgataca
tactggaaggatcgggcacaaaaggctgcagaggacaataaagcagcatactttgaagat
ccatattcagtctcgggaaacttcacttcctctgtcagcgaacttatagttgggaaggat
acgcgaaggagcttgaagggaaagaacggtgacggggggccatgcatggcgacgaacccc
attgacaggtgctggaggtgtgaccccaactgggccaacaacaggcagaagcttgcagat
tgtgttcagggctttggaagaaacaccgttggaggaaaaggtggtccgatctacgtggta
acagacccttcagacgataacatggttgacctaaagccaggaactctccgccatgcagtt
acacgtaatggcccgttgtggatcatctttgaacgcaacatgatcatccacctgaagcag
gagctcatcatgaccagcaacaagaccattgatggaagaggcgttgatgtctacatttcc
aatggtgctggcatcaccatccagttcatcaagaacgtgatcattcatggaattaaggtc
tacgacatttccgttcatggtggtgggctgatcagagattctgagacacattatgggctc
aggactcagagtgatggagatggcatttccatctttggttctagcaacatttggatcgat
catgtttccatgagaaattgctacgatggacttatcgatgccatcatgggatccactgcc
attacgatttccaatagccatttcacagaccacaacgaggcgatgctgttcggtgccagc
gacagctacgatgcagataagatcatgcaaatcactctggcattcaaccactttgggaag
agattgattcaaaggatgcccagatgcagacatggtttcttccatgtggtcaacaacgat
tacactcactgggaaatgtatgcgattggagggagcatgaaccccacgatcataagcgag
ggtaacagattcattggccctgacaacatatatgctaaggagatcacaaagagagaatac
tctcctgagaacgtgtggaaacaatggcagtggagatcaatcaacgatgagtacatgaac
ggagcattttttgtgcaatctgggcctgagcttgttaacagaccattctcaaggctagac
atgatcaaagccaagccaggaagttacgtcggaaggcttacacgctattctggaagcctt
aagtgcagagtgggtttcccttgctaa
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