Vigna umbellata (ricebean): 124845243
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Entry
124845243 CDS
T09662
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124845243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124845243
03036 Chromosome and associated proteins [BR:
vum03036
]
124845243
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124845243
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124845243
PBAF complex
124845243
GBAF(ncBAF) complex
124845243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
124845243
NCBI-ProteinID:
XP_047178266
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
GHSSLDFLRVDSTRDYGELDGENWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCIL
HFLRLPMEDGKLENINVPSTHLSSNAMDRDGSGRLHCYSNGDTAGPVHQVRDSDSRLPFA
NSGNPVMALVAFLASAVGPRVAASCAHAALAVLSVDNSGSTSQVEAPGHDNRTNSESIRC
RDGGSHGETAVSNNNNNEDKAKVHGSWGLNDGRTTPLSAEKVKDAAKAGLSAAAMKAKLF
ADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQLERTKQRFAAERSRVIS
ARLGTAGATPTMAVSGVGPSMASNGNNRQQMISASPSQPSISGYGSKQSLHPHMSFAPRP
SMFGLGQRLPLSMIQQSQSPSSTAMFNAPSNVQPTSNHPLLRPVSGTNSGLG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
ggtcattcaagtctagattttctaagggtggattcgacaagggattatggtgaactagac
ggggaaaattggactgatcaagaaactttactgcttcttgaagcaatggagatttacaat
gagaattggaacgaaattgctgagcatgttggtaccaaatcaaaagcacaatgcattctt
cattttctccgtctacccatggaagatggaaaattggaaaatattaatgttccgagcaca
catttgtcatccaatgcaatggatagagatggtagtggaagactgcattgttactcaaac
ggagatactgcaggacctgtccatcaagtgagagattctgacagccggcttccttttgca
aattctggaaatcctgttatggctttggttgcctttttagcctctgcagttggaccaaga
gtagctgcttcttgtgctcatgcagcattagcagtattgtcagtggataattctggcagc
acttcacaggtggaagcacctgggcatgataataggacaaattccgaaagcatacgatgt
cgagatggtgggtctcacggagaaacagcggtatcaaataataataataatgaggataag
gctaaggtacatggttcatggggactaaatgatggtaggacaaccccactatctgctgag
aaagttaaagatgctgctaaagcaggcctctctgcggcagcaatgaaagcaaaattattt
gccgatcatgaagagcgagaaattcagaggttgtgtgctaacatagttaatcatcagctg
aaaagattagagttgaagctgaaacagtttgcggaaatcgaaacattgttaatgaaagaa
tgcgaacaactggagagaacaaagcaaaggtttgctgctgaacggtctcgtgtaatatca
gcacgtcttggaactgcaggagccacacccacaatggctgtatcgggtgttggtccttca
atggctagcaatggcaacaacaggcaacaaatgatctctgcttctccctcacagcccagc
atctcagggtatggcagcaaacaatcacttcatccacatatgtcctttgccccacgacct
tcgatgtttggattgggacaaagattaccgctatctatgatacaacaatcacaatcacct
tcttcaactgccatgttcaatgcccctagtaatgtgcagcccacgtccaatcatccattg
ttgaggcctgtatcaggaacaaactctggtttaggttaa
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