Vigna umbellata (ricebean): 124845397
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Entry
124845397 CDS
T09662
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL6-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124845397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124845397
Enzymes [BR:
vum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124845397
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
HECT type E3
124845397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
124845397
NCBI-ProteinID:
XP_047178447
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSSKERDRKNLLEQTRLERNRRLWLRQQNSAALRIQKCLRGRK
VVRTEQSKLREKFLSIYGENCQNLDRNAFGPDSDFLRQFLYFFNAENIDDFLILVQICRL
LQQFVQETGDVVQLFAAEDYLSRCALVNYRVKQFVYTCIRAVHHNRYHLKDQLLLTLKES
NVSAIPLLEVLVLLIDPKLPXSCKIVSSLSKNSAFSLLREIILTGKDNAENCIYSEKGSS
LERVLTVVTSHIGQKPCICSPTDPVYSFSSQILSIPFLWHVFPNLKQVFAKQGLGQHYVH
QMATWLPNLMNSLPNDISDEFPTYACLLGNILETGGIALSRPDCSFDMAVDLASVTTFLL
ESYPSPTRSDGRENSKIADDEMTGEDEVMEVVLDRKLNQQISNAIDTRFLLQLTTILFRD
FSSSNGSDHEPEDREVAAVGAVCGFLHVIFNTLPLEKIMTVLAYRTELVPILWNFMKRCH
ENKKWSSLSERLSYLSGDAPGWLLPLSVFCPVYKHMLMIVDNEEYYEQEKPLSLRDIRSL
ITLLRQALWQLLWVNHTTSANLVKSGPVSTALKKQFEAIQQRVSIVVSELLSQLQDWNNR
RQFTSPSDFHADGVNDYFISQAIIENTRANEILKQAPFLIPFTSRAKIFTSQLAAARQRQ
GSQAVFTRNRFKIRRNHILEDAYNQMSQLSEDDLRGLIRVAFVNEFGVEEAGIDGGGIFK
DFMENITRAAFDVQYGLFKETADHLLYPNPGSGMIHEQHLQFFHFLGTLLAKAMFEGILV
DLPFATFFLSKLKQKHNYLNDLPSLDPELYRHLIFLKHYEGDISELELYFVIVNNEYGEQ
TEEELLPRGKNIRVTNENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNE
HELQLLISGSLDSLDVDDLRQHTNYAGGYRSEDYVIETFWEVLKGFSSENKRNFLKFVTG
CSRGPLLGFRYLEPLFCIQKAGGNASEEALDRLPTSATCMNLLKLPPYKSKEQMETKLLY
AINADAGFDLS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcagcggcgatccttctactcgtaagcgtgttgatttaggcggtcgcagctcg
aaggaacgggatagaaagaatcttcttgaacagacacgattagagcggaaccggcgtttg
tggttgcgccagcagaactctgctgcactcaggattcagaaatgcttaagagggagaaaa
gttgtcagaacagaacagtctaaactacgagagaaatttcttagcatctatggggagaac
tgtcagaatttagacaggaatgcttttggtccagattcagatttcctccgtcagttcctc
tatttctttaatgcagaaaatattgatgattttttaattcttgtgcaaatttgccgattg
cttcaacagtttgttcaagagactggggatgttgtccaactttttgctgctgaggactac
ttgtccaggtgtgctttggtgaactatcgagtgaagcaatttgtatatacttgtattcgt
gctgtacatcataataggtatcacttgaaggatcagcttttattaactctgaaggaatct
aatgtatctgctattcctttattggaagtcttagtattgttgatagatcccaaactgccg
tagagctgtaagatagtatcaagtctgtctaaaaacagtgcatttagtctacttagagag
attattcttacaggaaaggataatgctgaaaattgtatttacagtgaaaaaggatcatca
ttggagcgtgtgcttactgttgtaactagccacattggtcagaagccatgtatctgttca
cctactgatccagtatatagcttctcatcacagatcctttcgattcctttcttgtggcat
gtttttccaaacctaaaacaggtatttgcaaagcagggcctgggtcaacattacgttcat
cagatggcaacatggttaccaaatctgatgaattctcttcctaatgatatatcagatgaa
tttcctacctatgcctgtcttcttggaaatatattagaaactggtggaattgctttgtct
cgacctgactgttcattcgatatggctgtagaccttgcttctgttactacatttttgctg
gaatcatatccatctccgacaagatctgatggtagagagaattctaaaattgccgatgat
gaaatgactggcgaagatgaagtcatggaagtagttttggataggaaattgaatcaacaa
atttctaatgccattgatactcgcttccttttgcaactgacaactatattatttagagat
ttttcatcttcaaatggttcagatcatgagccagaggacagggaggttgcagctgttggt
gcagtttgtggatttttacatgttatcttcaacacattgccacttgaaaagattatgact
gtacttgcctacagaactgaacttgttcctatactttggaattttatgaaacggtgccat
gagaacaaaaaatggtcatctttgtctgaacggttatcgtacctctctggtgatgcacca
ggttggctgttgccactttctgtattctgtcctgtttacaagcatatgctcatgatagtt
gataatgaggagtattatgagcaggagaaaccactatcactgagggatattagaagcctt
atcactcttctaaggcaggctctgtggcagttattgtgggtgaatcacaccacgtctgcc
aatttggtaaaatcgggtcctgtcagcacagcacttaaaaagcagttcgaagctattcaa
cagagggttagcattgtagtctctgagcttctgtcccagctgcaagattggaacaacaga
agacagtttacatcacccagtgacttccatgctgatggggtgaatgactactttatctct
caggccattatagaaaatacacgagcaaatgaaattttgaagcaggctcctttcttgata
ccatttactagcagggctaaaattttcacttctcagctagctgctgctaggcaaagacag
ggatctcaggctgtttttactagaaaccgtttcaaaatacgtcggaatcatattttggaa
gatgcctacaatcaaatgagtcagctgtcagaagatgaccttcgaggactgattcgtgtg
gcttttgttaatgaatttggagttgaagaggcaggaatagatggaggtggaatattcaaa
gattttatggagaacatcacacgtgctgcatttgatgtgcaatatggattatttaaggag
acagcagatcacctgctatatcctaatcctggatcaggaatgatacatgaacaacatctc
caatttttccattttcttggtactcttcttgcaaaggctatgtttgaagggattctggtt
gatttaccatttgctactttctttttgagcaaattgaaacaaaagcacaactatctaaat
gatttgccttccctggatccagaattatatcgtcatcttatttttcttaagcattatgag
ggtgacatttcggagttggaactatattttgttatagtaaacaatgaatacggagagcaa
acagaagaggagctgcttccacggggaaagaacatccgtgttactaatgagaatgtcatt
acttttattcatctagtagccaatcaccgcttgaattttcagatacgtcaacaaagttct
catttcctgagaggatttcagcaacttattcagaaggattggattgatatgttcaatgag
catgaacttcagcttttgatatcaggttcacttgacagcttggatgttgatgatttacgg
cagcatacgaactatgcaggaggctatcgtagtgaggattatgttattgagacgttctgg
gaagttctcaaaggcttttcatcagaaaacaaaagaaactttttgaaatttgtgacaggt
tgctctcggggaccattgcttggattccgatatcttgaacctttgttttgcatacaaaag
gccggtggtaatgcttcggaggaagctcttgaccgattaccgacatcagccacctgtatg
aatttactaaagcttccaccttataaaagtaaagagcaaatggaaaccaaattattgtat
gccattaatgctgacgctggatttgatttgagttaa
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integrated database retrieval system
