Vigna umbellata (ricebean): 124845468
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Entry
124845468 CDS
T09662
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124845468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124845468
03110 Chaperones and folding catalysts [BR:
vum03110
]
124845468
03029 Mitochondrial biogenesis [BR:
vum03029
]
124845468
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vum04147
]
124845468
Enzymes [BR:
vum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
124845468
Messenger RNA biogenesis [BR:
vum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
124845468
Chaperones and folding catalysts [BR:
vum03110
]
Heat shock proteins
HSP60 / Chaperonin
124845468
Mitochondrial biogenesis [BR:
vum03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
124845468
Exosome [BR:
vum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124845468
Exosomal proteins of other body fluids (saliva and urine)
124845468
Exosomal proteins of breast cancer cells
124845468
Exosomal proteins of colorectal cancer cells
124845468
Exosomal proteins of bladder cancer cells
124845468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
124845468
NCBI-ProteinID:
XP_047178523
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MYRFASSLASKARIARSGSKQLGSTLSWSRNYAAKDIKFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSFGGPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGISMAVDTVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNDK
NQKCELEDPLILIHEKKISSINAVVKVLELALKRQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKSALQDLAVLTGGALITEELGLKLEKVDLDMLGTCKRITISKDD
TVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNALKT
PVLTIASNAGVEGAVVVGKLLEQDDHDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVSELPKDDKDTPAMAGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgctttgcttctagcctcgcctccaaagcaaggattgctaggagtggcagcaaa
cagcttgggagtacgttgagctggagccgaaattatgcggctaaggacattaaatttggt
gtggaggctcgggctctgatgcttaagggtgttgaagagcttgcagatgctgtcaaagta
accatgggtcccaaggggcgtaatgtggttattgagcaaagttttggtggccctaaagta
actaaagatggagtaactgttgcaaagagcattgaattcaaggataaagttaagaatgtt
ggcgccagtctcgtaaagcaggttgctaatgctactaatgatgtggctggtgatggaacc
acatgtgccacggtccttacaagagccatatttactgaaggctgcaaatcagttgcagct
ggaatgaatgcaatggacctgaggcgtggtataagtatggctgttgacactgttgtaaca
aacttgaaaagcagagctcggatgattagcacatctgaagaaatagcacaggttgggaca
atatctgctaatggagagcgagaaattggtgagctgattgccaaagctatggagaaagtt
ggcaaagagggagtcatcacaatttcagatggcaaaactttatataatgagttggaggtt
gttgaaggaatgaagcttgacaggggctacatatctccttattttataacaaatgataag
aaccagaaatgtgaacttgaggatcctctcattctaatccatgagaagaaaatctcaagt
ataaatgctgtagttaaagttttagagttagctttgaagagacaaagaccattgttaatt
gttgctgaagatgttgaaagtgatgcacttgcaacacttattctaaataagcttcgtgct
ggaattaaggtatgcgctattaaagcccctggttttggtgaaaataggaagtccgctctt
caagatcttgcagttctaacaggaggagcacttatcactgaagaacttggcttgaagctt
gaaaaagtggacttggatatgcttggcacttgcaaaagaataacaatttctaaggatgac
actgtcattcttgatggagctggtgacaagaaatcaattgaggaaagatgcgaacagatt
aggtcagcaattgaaaatagcacctcagattatgacaaggaaaagttacaggaaagattg
gccaagctttctggtggtgttgcagtgctcaagattggaggagccagcgaagccgaagtt
ggtgaaaagaaggatagggtgacagatgccttgaatgcaactaaggctgctgttgaagag
ggcatagtacctggtggtggtgttgctcttctatatgcatcaaaagagttggataaactt
caaactgctaactttgatcagaagattggtgtccagattatccaaaacgctttaaagaca
cctgtgctcacaattgcatcaaatgcgggagttgagggtgcggttgttgttggcaaacta
ttggaacaagacgatcatgatctaggatatgatgctgccaagggtgagtatgtggatatg
gttaaatccggaatcattgacccattgaaggtgattaggacagccctggttgatgcagca
agtgtatcatctttgatgacaaccactgaagctgtcgtgtctgaacttcctaaggatgat
aaagatactcctgctatggctggtggaatgggtggcatggattattaa
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integrated database retrieval system
