Vigna umbellata (ricebean): 124845558
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Entry
124845558 CDS
T09662
Name
(RefSeq) ribosomal RNA large subunit methyltransferase F isoform X1
KO
K11393
U6 snRNA m6A methyltransferase [EC:
2.1.1.346
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124845558
Enzymes [BR:
vum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.346 U6 snRNA m6A methyltransferase
124845558
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
124845558
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_10
PrmA
Motif
Other DBs
NCBI-GeneID:
124845558
NCBI-ProteinID:
XP_047178627
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MGGSKKRKRNKQQQESNDIVYSESQPDFAHLAILYPSFQSFVQPSPSHMRLTIDWTDFNA
TRELTRILLHHRHTLTWWIPDGQLCPTVPNRSNYIHWLEHLLLSNMIPGNISSDSKVRGF
DIGTGASCIYPLLGASLHGWSFVGSDVTDVAIEWAEKNVSSNPHISHLIEIRRVQDNNAP
CVEVEDLVNSDQITLCKKTDMEVAPLPLDLHACENKSYRGPPILVGVVRDGEKFDFCMCN
PPFFESLEEAGLNPKTACGGTSREMVCPGGERAFITRIIEDSTQLKQHFRWFTSMVGKKS
NLKYLVSKLWGVGVSIVKTTEFVQGRTYRWGLAWSFLPPVQKSSISLSNKKNTSFTLEGL
QRQHGAINVLESVKSHFSSYGLSCSLNTSSFTVDVAVTKDECDSILRNELTIVNDSTDCQ
PTRETSNESSLNFSLERLCFRISVFQQIPGTLLVKGSLQDKDSPLSGAFSVIFRKLEEAL
RSKF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggagcaagaaaaggaagagaaacaaacagcaacaagaaagcaatgacattgta
tattcagaaagccaaccagactttgctcatttggcaattctctacccttccttccagtca
ttcgtccaaccctcaccttctcatatgcgcctcaccattgattggaccgacttcaacgcc
acacgggaactcacacgtatcttgctccatcatcgtcacactttgacttggtggattccc
gatggacaactctgtcccactgtgcccaaccgctccaattacattcactggcttgaacat
cttcttttatctaacatgattcctgggaacatttcaagtgattccaaggtcaggggattc
gacataggaactggagctagctgcatttaccctcttcttggtgcttccctccatggctgg
agttttgttggatcagatgtgactgatgtagcaattgagtgggcagaaaaaaatgttagt
agtaatccacatatttctcatctgattgaaatcagaagggttcaagacaataacgctccc
tgtgtggaagttgaagatttagtgaacagtgaccagataactttgtgcaaaaaaactgat
atggaggtagctcctttgcctcttgatttgcatgcctgtgagaataagagttatcgtgga
cctcccatacttgttggtgtggtcagggacggtgagaagtttgatttttgtatgtgcaat
ccaccattttttgaaagtttggaggaagctggactcaatcccaaaacggcttgtggtgga
acttctcgtgaaatggtttgtcctggcggtgaaagggccttcattactcgtatcattgaa
gatagtacacaattgaaacagcattttcggtggttcacttcaatggttggtaaaaagtca
aatcttaagtacctcgtatcaaaactttggggggttggcgtttcgatagtgaagacaact
gaatttgttcaaggcaggacataccggtgggggcttgcttggtcattcttgccacctgtg
cagaagtcatcaatttctttatccaataaaaagaacacatccttcacgcttgagggtctt
caacgccaacatggtgccattaatgtgttggaaagtgttaagtctcacttctcttcatat
ggtctatcctgctcattgaatacctcctctttcacagtggatgttgcagtaacaaaagat
gagtgtgattcaatcttgaggaatgaattaacaattgtcaatgattccactgattgccaa
cctacaagagagacatctaatgaatcgagtttgaatttttctctcgagagattatgcttt
cgaatatcggtttttcagcaaatccctgggacactgttggtgaaaggctcattacaagac
aaggatagcccgttatcaggagcattctctgtgattttccgaaaattagaggaagctttg
cggagtaaattttga
DBGET
integrated database retrieval system
