Vigna umbellata (ricebean): 124846281
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Entry
124846281 CDS
T09662
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124846281
Transcription machinery [BR:
vum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
124846281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
TEX33
DUF3263
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
124846281
NCBI-ProteinID:
XP_047179462
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MGVVTVSTSAARTPLRLSTKLISRQQAHKRLLIVAFKGNKSNKTTLVSPQEQIPLPVETA
KKQRKRIEKSNESLKRVRAVSTDETSPFTMVVDYNEAAAKLENIYKLSSVSDTCETEDTD
SKTKRVFRRRKKVGDEHDGRNDDHVVRNLNKKAKRLSLDKRIALKRNAKEKVIVQAQKKR
DVNKVEKIDALIREYSASTDLVSMDWRKMKIPPVLPSSEHAWLFKLMEPMKSLLQMREDL
QEAGKEISDGELADANSTSIVQVRKAIEIGQAARNKLIKHNLRLVLFVINKYFQDFASGP
RFQDLCQAGVKGLITAIDRFESKRRLQLSTYGLFWIRHSIVRSITLSSFTRVPFGLDRVR
ADIHRAKLELTFEHQRSPTEEEVLKRIGISPERYYDVLKASKPILSLHSRHITTQEEFIN
GITDLDGVDADNRRQVAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLN
ISREMVRKHEVKALMKLKHPARLDYLRRYVV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttactgtttctacctcagctgctaggactccattaagattgagtacaaag
ttgatcagtcgtcagcaggcacataaacgactcttaattgtagcttttaaaggaaataaa
tcgaataaaaccactttggtttcacctcaggagcaaattcctctacccgtggaaacggca
aagaaacaaaggaaaaggatagaaaaaagtaatgagtcgctgaagagagtgagagctgtc
tctactgatgaaacctctccattcaccatggttgtggactacaatgaagctgcagccaaa
cttgaaaatatatataaactcagctccgtatctgatacttgtgagacggaagatacagat
agtaaaaccaagagagtattccggaggaggaagaaggttggtgatgaacatgatggcaga
aatgatgatcatgtggttagaaacctgaataagaaggccaaacgattgagtcttgataaa
aggattgcattgaaaaggaatgcaaaggagaaggtaattgttcaagctcagaaaaaaaga
gatgttaataaagtagagaaaattgatgcgcttatcagggagtattcagcatcaactgat
ttagttagcatggactggaggaaaatgaaaattccgccagttcttccttcttcagaacat
gcatggttatttaagttgatggaacctatgaagtcactcctacaaatgagagaagattta
caggaagcagggaaagaaatttcggatggtgaactagcagatgcaaatagcactagcatt
gttcaagtaaggaaagctatagaaattggtcaagctgcgagaaacaagctcataaagcac
aatctccgacttgtattgttcgtgattaacaaatattttcaagattttgcaagtggtcca
aggtttcaagatctttgtcaggctggagttaagggacttatcactgcaattgatcgattt
gagtcaaaaaggagacttcagctatctacatatggtctattttggattagacattcaatt
gttcgttccataaccctctcaagcttcacacgtgttccttttggacttgacagggtcaga
gcagatatccatagagcaaaactcgagttaacatttgagcaccagaggtcaccaacggaa
gaggaggtattaaaaagaattgggatctcccctgaacgatattatgatgtactgaaggca
tcaaaacccattctatctctgcattcaagacatataaccacgcaggaagagtttattaat
gggattactgatcttgatggtgtggatgctgataataggaggcaagttgctgttctaaga
cttgctcttgatgacgtgcttgattccttgaagccaaaggaaagcttagtgattagacag
agatatggacttgatggcaagggtgacagaaccttgggagaaatcgctgggaacttgaat
atttcaagggaaatggttcggaagcatgaagtcaaggctctcatgaagcttaagcaccct
gctcggttggattatctccgtcgctatgttgtatag
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