Vigna umbellata (ricebean): 124846342
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Entry
124846342 CDS
T09662
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Module
vum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124846342
Enzymes [BR:
vum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
124846342
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
124846342
NCBI-ProteinID:
XP_047179536
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MALLKHLFFSFTIFIISFVFCYGSLQEDPLTSIYVHHSPSVDDGGTLFKNFNKQSANVLS
LNRFEKRGSLKKVNVNDYGAKRNGDTDDSEAFKKAWDEVCDSGEAILVVPKDNYLLKPIR
FSGPCKPNIEVQISGTLEAADDPSDYDEDSRHWLVFEKIKNLYVYGGGTLDGNGKVWWEN
SCKKNKKRPCKDAPTALTFDRCEDLTVENLNIENAQQIHVSFQDSENVKVSGLNVNAPED
SPNTDGIHVTKTKNIQISDSVIGTGDDCISIVHGSKNVEATNITCGPGHGISIGSLGAGK
SKDVVSGIKVNGAKIFGTKNGVRIKTWQGGSGSASDIKFQNIEMSNVTNPIIINQNYCDK
KKRPCQKAGSEKSAVEIKNVVYENISGTSASDVAVKFDCSEKFPCQKIKLQNIDLACEGG
DDAEALCNNVDKLSYIGHVKPRCSKE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggccctcctcaaacacctcttcttctccttcaccattttcatcatttcttttgttttt
tgttatggcagcttgcaagaggacccactcaccagtatatatgttcatcattcaccttcc
gttgatgatggtgggacattattcaagaacttcaacaagcaaagcgcaaatgttttgagc
ttaaacaggtttgagaagcgtggctcccttaaaaaggttaatgtcaatgattatggagct
aagaggaatggtgatactgatgactcagaggctttcaaaaaggcttgggatgaagtatgt
gattctggggaagcaattcttgtggtgcctaaggacaattatcttctcaaaccaataaga
ttctctggcccttgcaaacctaacattgaagtccagatttctggaacacttgaagcagca
gatgatccatcagattatgacgaggacagcagacactggcttgtgtttgaaaaaattaag
aacctgtatgtttatggtggtggaaccctcgatggaaatggcaaagtatggtgggaaaac
tcatgcaaaaagaacaaaaagcgaccttgcaaggatgctccaacagctctgactttcgat
aggtgtgaggacttgacagttgagaacttgaacatagaaaatgctcaacaaatccacgtt
tcattccaagactccgagaatgttaaggtttctggccttaacgtgaatgcaccagaggac
agccccaacaccgatgggattcatgtcacgaaaacaaaaaacatccaaatctcagattct
gtcattggaactggtgatgattgtatatctattgtacatggatctaaaaatgtagaagct
acaaacattacatgtggaccgggacatggtatcagtatcggaagcttaggtgcaggaaaa
tccaaggatgttgtttcgggaataaaagtgaacggagccaagatttttggaaccaaaaat
ggagttagaatcaagacatggcagggaggttcaggaagtgctagtgacatcaagtttcag
aacattgagatgagcaacgtgaccaaccccataataataaatcagaattactgtgacaag
aaaaaaaggccatgccaaaaagcgggctcggagaaatccgctgtagaaatcaagaatgtg
gtgtacgagaacatcagtggtacaagtgcttctgatgtagctgtgaagtttgactgcagt
gagaaatttccatgccagaagataaaattgcagaacatagaccttgcatgtgaaggagga
gatgatgctgaggctctgtgtaacaatgttgataagttatcttacataggacacgttaag
cctcgttgcagtaaagaatga
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