Vigna umbellata (ricebean): 124846353
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Entry
124846353 CDS
T09662
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124846353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124846353
Enzymes [BR:
vum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124846353
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124846353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_TRAF
Sina_RING
DZR
PHD_2
zf-RING_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
124846353
NCBI-ProteinID:
XP_047179548
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MDLESVECVSSSDGMDEDEIHTNHHHSEFSSTKPRNGGTNNVNSVGSTALAPATSVHELL
ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC
KYYSLGCSEIFPYYSKLKHETVCNYRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHT
GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMXSMYP
PIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCSEIF
PYYSKLKHETVCNYRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKS
NPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVG
ANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQ
NSDAGVCMPNLCS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggacttggaaagcgttgagtgtgtgtcatcctcggatggcatggatgaggatgagatc
cacaccaatcatcatcactctgagttttcttccacaaagcctcgcaatggaggcaccaat
aacgttaattctgtggggtccaccgcccttgctccggcaaccagcgtccatgagttgctg
gaatgtcctgtgtgtactaattcaatgtaccctccaatccaccagtgtcacaatggccac
acactctgttccacttgtaaaacaagggtgcacaaccgatgtcccacttgtagacaagag
cttggagatattaggtgtctggcactggaaaaggtggctgaatcacttgagctaccttgc
aagtactactcccttggatgttcagaaatctttccatactacagcaagcttaagcatgag
acagtatgcaattatagaccatatagttgcccttatgctggatcagagtgttctgtcgtg
ggagatattcccttccttgttgctcatttaagggatgatcataaagtggacatgcacaca
ggatgcacattcaaccatcgttatgtgaagtcaaatccacgtgaagtggagaatgcaacc
tggatgctcacagtgtttcattgttttggccaatatttctgccttcattttgaagctttc
cagcttggcatggcacctgtttacatggcatttcttcgttttatgnattcaatgtaccct
ccaatccaccagtgtcacaatggccacacactctgttccacttgtaaaacaagggtgcac
aaccgatgtcccacttgtagacaagagcttggagatattaggtgtctggcactggaaaag
gtggctgaatcacttgagctaccttgcaagtactactcccttggatgttcagaaatcttt
ccatactacagcaagcttaagcatgagacagtatgcaattatagaccatatagttgccct
tatgctggatcagagtgttctgtcgtgggagatattcccttccttgttgctcatttaagg
gatgatcataaagtggacatgcacacaggatgcacattcaaccatcgttatgtgaagtca
aatccacgtgaagtggagaatgcaacctggatgctcacagtgtttcattgttttggccaa
tatttctgccttcattttgaagctttccagcttggcatggcacctgtttacatggcattt
cttcgttttatgggtgatgagaatgaggctcggaattatagctatagcctagaggttggg
gccaatggtagaaaactcatctgggagggtacgccacggagtgttcgagatagccaccgt
aaagtgagggatagccacgatgggctcatcattcaaagaaatatggctctatttttctct
ggtggggacagaaaggagctgaaactcagagttacaggaagaatatggaaggagcaacag
aattctgatgctggtgtgtgcatgccaaatctctgtagttga
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