Vigna umbellata (ricebean): 124846400
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Entry
124846400 CDS
T09662
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vum04131
]
124846400
Membrane trafficking [BR:
vum04131
]
Protein recycling
Others
EARP complex
124846400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
124846400
NCBI-ProteinID:
XP_047179602
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MQPNLFPFGSVLGNPFIFNGDLSEGGIESSRVFFLLPFFLLSQGGAMDLSKVGEKFLSSV
RSARSIGLLPPVPDRPEVPARASAAAAVARALAGLPPHQRYSFSSSSEELSSIYGSRPQG
QVVEELEDEFYEEDFDPIKHILEHVPADENELTYFEKQAALRLVQLDKVAEHLSRHVMEH
HEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLP
TLIELQRALNMQSTLESLVEEGNYWKAFQVLSEYLQLLDSLSELSAIQEMSRGVEVWLGR
TLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSVLKGV
MHEDEEDILQNSRLTYSDLCLRIPDSKFRQCLLRTLAVLFDLMCSYHEIMDFELERKDIV
QNSNKCNEEISCSPGAQEVDSDVRASNNSLSSSGDILHGSSSREESATMSSLTETSGSPY
SDYHDPIKETGKEDSATLNIESPWYHLRKEATTFVSQTLQRGRRNLWHLTASRVSVLLSS
AAVCTASIYQFLKNYEELSVFILTGEAFCGIEAVEFRQKLKAVCENYFTAFHRQNVHALK
MVMERETWLKLPLETVQMISFAGLIGDGAPLISLSSGKSINAGAFHSHKSVNMVHTGARK
NGFSQWIKSGNPFLQKLPNSNEGHGYSQPNGLVHGESDGSSTKYFYDDRTPRNNDSNHIN
GANSLSEDEDEDLLADFIDEDSQLPSRSSKPFHSRTLSSHGNDDENTTQTGSSLCLLKSM
DKYARLMQKLEVVNVEFFKGICQLFEIFFYNIYETFGQQNTSSSGKSSTNSLNYRLRTAL
SRINQDCEEWIKPQSSSPTSLTSSFAHAELTPTNPPNANLGHSSGTSFGLTERCVAVDTI
SLVARILNRSKAHLQSMLLQSNSTILEDFYVHLVDAVPDLTEHIHRTTVRLLLHINGYVD
RVANCKWELKDLGMEHNGFVFFESSLYLNSRSFFSSWYITCSCYFISKVSNYCTQELMYV
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaacttgtttccctttggaagtgtgctggggaatccgtttattttcaatggt
gatttgagtgagggagggatcgagagctctagggttttcttcttgctcccgttcttcttg
ctctcccagggaggagcaatggatttgtccaaggttggggaaaaattcttgagctccgtt
aggtccgcgagatctatcggattgctccctcccgttcctgatcgtcccgaggttccagct
cgagcttcagcagctgctgccgtagctcgtgctcttgcagggttacctcctcatcagaga
tatagtttttcttcaagttcagaagaattgagttcaatatatggaagcagacctcaaggc
caagtagtcgaggagctggaggatgagttctatgaagaggactttgatccaattaagcat
attttagagcatgttccagctgatgagaatgagctaacatattttgaaaaacaggctgcc
cttagattggtacaactggataaagtggctgaacatttatctcgccatgttatggagcat
catgaagtaatggtgaaggggatgaatttggtcagagaattggaaaaagacttaagaatt
gcaaatgtcatctgtatgaatggaaggagacatttgacatcgtctatgaatgaggtttca
agggatctgattgtgaattcttattccaaaaagaaacaagctcttctggacatgcttcca
accttgattgaacttcaacgggctctgaacatgcaatcaacacttgaatccctagtagag
gaagggaattactggaaggcctttcaagttctatctgagtatttgcaactcttagatagt
ttgtcagagctttcagcaatacaagaaatgagtcgtggtgtggaggtttggctgggaaga
acgttgcaaaagctggatgctcttttattgggagtatgtcaagaattcaaggaagatggc
tatataacagtaattgatgcatatgcattaataggggatactgctggtcttgctgaaaag
atacagagtttcttcatgcaagaagttatatcagaaacacactctgtattaaagggtgtc
atgcatgaggacgaggaggatattttgcaaaatagtaggctcacttacagcgatctatgc
ctcagaatacctgattcaaagttcaggcaatgcttattaagaacgctggctgttctattt
gaccttatgtgttcataccatgaaattatggatttcgagctggaaagaaaggacatagta
caaaattcaaataagtgcaatgaagagatttcctgtagtccaggcgctcaggaagttgat
tcagatgtaagagcctccaacaattctttgtccagttcaggagatatattacatggttca
tcttctagggaggaatctgcaacaatgagctctctgactgaaactagtggttcaccatac
agtgattatcacgatccaattaaggagactgggaaggaggacagtgcaacgttaaacatt
gaatccccttggtaccatcttcgtaaagaagctacaacctttgtgtcacagacccttcaa
agagggcgaaggaatttgtggcatctcaccgcaagtcgagtgtctgttttgctttcttct
gcggcagtttgtaccgctagtatatatcaattcttgaaaaattatgaagaactcagtgtg
tttattttgactggggaagccttttgtggaatcgaagcagttgaatttaggcagaagcta
aaggctgtgtgtgaaaactatttcacagcttttcatcgacaaaatgtgcatgcactaaaa
atggttatggagagagagacttggctaaaattacctctagaaacagtacaaatgatcagt
tttgcaggacttattggtgatggcgcacccttgatttctttatccagtggcaaatcaatt
aatgccggtgcattccattctcataaatcagtgaatatggttcatactggtgcaaggaaa
aatgggttttcccagtggatcaaaagtggaaaccctttcttgcaaaaattacctaactcc
aatgaaggtcatggttactcccaacctaatggattagttcatggtgaatctgatggaagt
tcaaccaaatacttttatgatgatagaacacccagaaacaacgattccaatcacataaat
ggtgccaattctctttcagaagatgaagatgaggatcttcttgctgactttattgatgaa
gacagccaactaccaagtcgaagttctaaaccctttcattcaagaactctttcttcacat
ggtaatgatgacgagaatacaacacaaactggatcttctctctgtcttttaaagtctatg
gataaatatgcaaggcttatgcagaaattggaagtggtaaatgttgagttctttaaggga
atatgccaattgtttgaaatatttttctataatatatatgaaacatttggtcagcaaaac
actagctcaagtggaaaaagctcaactaactctcttaattatcgcttgagaacagctttg
tctagaataaaccaagattgtgaagagtggattaagcctcaatcgtcttcaccaacatct
ttgacctcttcatttgcacatgcagaattgacacctacaaacccgcccaatgcaaatctt
ggtcattcctcaggcacctcttttggtctcacggaaagatgtgtggctgttgacactata
tcacttgttgctcgaatactgaatagatctaaagctcatctccaatcaatgctcttgcaa
agtaattcaactatacttgaggatttctacgttcatctggtggatgctgtaccagatctt
acagaacatattcatcggactacagtgagactattgttgcacattaatggatatgttgat
cgtgttgccaattgtaaatgggaattaaaagatcttggcatggagcataatgggtttgta
tttttcgaatcatctttatatttgaattccaggtcttttttttcctcttggtatattact
tgtagttgctattttatatcaaaggtaagcaactactgcacacaggagttaatgtacgtg
taa
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