Vigna umbellata (ricebean): 124846619
Help
Entry
124846619 CDS
T09662
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124846619
03041 Spliceosome [BR:
vum03041
]
124846619
03036 Chromosome and associated proteins [BR:
vum03036
]
124846619
Enzymes [BR:
vum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124846619
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124846619
mRNA cycle factors
Common to processing body (P body) and stress granule
124846619
Spliceosome [BR:
vum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124846619
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124846619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Mcm-like_N
Motif
Other DBs
NCBI-GeneID:
124846619
NCBI-ProteinID:
XP_047179861
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MPTSWADLAANSASENAGTSNSTAPTRPVYVPPHLRNRAASASASTESPPAPPNVSSNNV
GSRWGAPRNGWGNRTGGWDRREVNPFEDQEDAAEEGAAASGEEQGNMGINFDAYEDIPVE
TSGENVPPPVNTFAEIDLGDALNHNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSG
KTAAFCFPIISGIMRGQGQAPLRPPRGVRTVYPFALVLSPTRELSVQILEEARKFSYQTG
VRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIKYLALDEADRMLD
MGFEPQIRKIVEQMDMPPPGARQTMLFSATFPREIQRLASDFLSNYVFLAVGRVGSSTDL
IVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCRNGFPA
TTIHGDRSQQERELALRSFKTGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR
IGRTGRAGKKGLATAFFNDNNASLARPLADLMQEANQEVPDWLSRYAARSSIGGGRNRRT
GGSRFGGRDFRREGSFSRGGSDYYSTGNNNGGYGNSGGYGGGYGPGVTSAWD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgccaacatcgtgggctgatttggctgcgaattccgcctctgaaaatgcgggaacatcc
aactccacagctccgacgcggcctgtttatgtgcctccgcatctgagaaaccgtgcagca
tcagcatcagcatcaacggaatccccccctgctccgcccaatgtgagttctaataatgtc
ggatcacggtggggtgcgcccagaaacggttgggggaacagaaccggtggttgggatcgg
cgggaagtgaaccccttcgaagatcaggaggatgcagctgaagagggagcagcagcttct
ggcgaggagcagggaaacatgggaattaattttgatgcttacgaggacattcccgttgag
acgagtggtgaaaacgtgcccccacctgtgaatacttttgcggagattgatttgggcgat
gctcttaatcataacattagacgctgcaaatatgttaaaccaacgccggtccagcggcat
gccatacccatatcccttggcggtcgggatttgatggcttgtgctcagactggttccgga
aagactgcagcattctgtttccctattatcagtggcattatgagaggtcaagggcaggcc
ccccttcggccccctcgcggtgtccgtacagtctatccatttgcccttgttctctcgccg
actagggagttatccgtgcaaatacttgaagaggctaggaagttttcataccagacaggg
gtcagggtcgttgttgcctatggtggagctcctataaaccagcagctacgggaacttgag
agaggggtggacattcttgttgcaactccaggaagattggtagatttgctggagagagct
agagtttcattgcagatgatcaaatatttggccttagatgaggcagataggatgctggac
atgggttttgaaccacaaataaggaagattgtagaacaaatggacatgcctccaccaggt
gccagacagactatgttgttcagtgccacatttccaagagagatacagagactggcctct
gatttcctttcaaattatgtttttctggccgttggaagagtgggctcaagtaccgatttg
attgtccaaagagttgagtacgttcaagagtctgacaagagaagtcacctcatggatctt
cttcatgcgcagagggcaaatggggtacaaggaaagcaagctttgactttagtttttgtg
gagacaaagaagggagctgatgctctcgagcattggttgtgtcgtaatggttttccagca
actactattcacggtgacaggtcacaacaggaaagagaattggcattaagatcatttaaa
actggcaacacccccatattggttgcaactgatgtggctgcacgcgggcttgatattcct
catgttgcccatgtggttaactttgaccttcctaatgatattgatgattatgtacaccgt
attggaagaacagggcgagcaggaaagaaaggccttgcaactgcgttctttaatgacaac
aatgcatcactagctaggcctttagcagatctgatgcaagaagcgaatcaagaagtacct
gattggctctcacggtatgctgctcgctcttctattggtggtggacggaaccgtcgaaca
ggaggaagccgatttggtggccgtgactttcgaagagaaggttcttttagtaggggtggt
tctgattactacagtacaggaaacaacaatggtggatatggcaattctggtggttatggt
ggaggatatggtcctggggtaactagtgcttgggactga
DBGET
integrated database retrieval system
