Vigna umbellata (ricebean): 124847572
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Entry
124847572 CDS
T09662
Name
(RefSeq) SAC3 family protein B isoform X1
KO
K23719
nuclear mRNA export protein SAC3
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124847572
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
124847572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAC3_GANP
INT10
Motif
Other DBs
NCBI-GeneID:
124847572
NCBI-ProteinID:
XP_047181044
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MSSYLGFGKASGPSAPPKSDSPYSFGFTNPSPIPPTSSPDPAFSSQSTPRSIDSSSWSDE
QKIFYKDLETHTPQRPSPATTFISSRDSTTGLTARTSGFPNPERRSPPISYADVEDLGNS
DQPVTINNGSFFRPSLSPPRLGSTSTVPRTGPHSQIHQKSFPFNVPEATVGKPMNSTASK
RTRSPASSFAANETLEGNLISSEDNSEREILAKAKRLARFKVELSRSEQNNVDIPDQKAF
ASRSEQSVLEPKYVRGHLVDSASNFSSAHVVADNEVLETSNVIIGLCPDMCPESERGERE
RKGDLDQYERVDGDRNVTSRLLAVKKYTRTAEREASLIRPMPILKNTIDYLLTLLDRPYD
ERFLGVYNFLWDRMRAIRMDLRMQHIFNQGAITMLEQMIKLHIIAMHELCDYTKGEGFSE
GFDAHLNIEQMNKTSVELFQMYDDHRKKGMNIQTEKEFRGYYALLKLDKHPGYKVEPAEL
SLEIAKMTPEIRQTPEVLFARSVARACRTGNFIAFFRLARKATYLQACLMHAHFAKLRTQ
ALASLHSGLQNNQGIPVAHVANWLAMEDESIEGLMEYHGFLLKIFEEPYMVKEGPFLNVD
VDYPTKCSKLVHKKRSGRIIEDISLSIQAESPHVETMKEIQMRKPEPQVASPVKNDSSVQ
NPDEEIPDAVAIYSPEVSRKAFKDVPDSPKDKDISGHRLSPLSSPFPNIIPEQQLPRFGV
FNGTNSDLIARGSPNRNFQFSVEQRPLEIIPKKAPPESSLGFSFSVPPPVSHAVFKDEPL
IIHQEHEDEINEFSENCQDEEIAEAKLKLFLRLWRRRASKLRMLREERQLASNAALDSMS
LGPPIQHYIDRPGNFDKFDIDIAMRERYEKQEKSWSRLNVSDVVASTLGRRNPDAKCLCW
KIILCSQMKTGYEMGGAGTWLTSKFMPSSDEDVVFSSPGLVIWRKWISNQSVINPSCCLS
VVRDTAFGSLDEAVSGAGAVLFLVSENISWELQRSRLHTLLMSIPSGACLPLLILCHSYD
ERFSSAITNELGLQNIDKLKISKFLLVFLYENQRMEHLSGFFSDTRLREGLEWLACESPL
QPNIGCVKTRELVYAHLNSFPGGQRIAINSNLGPNDCISLFNEALDRSIKEITATASSNP
TGWPCPEIGLLDKFCDEDRVVKMCLPTLGWSSNEKTEPIIRALQNCKLPTFPGDLSWLAR
GSKVGQEIEHQRKQLENCLIQYLTHTSKTMGIALATKEASVTMQSCARLELRGSNYHVIP
HWGMIFRRIFNWRLMGLSSREISMAYISERHHVALPNVSPETWLSYYPDTSLDEIISVSC
NSPLPVKHQPLQRLPRMVSNDVFQGTVNQTDSENNLPLDKSPTMDSATTFSNAKPNTEAD
KLSKLLDHCNLLQDSIDKKLFLYY
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtatttgggattcgggaaggcttcaggacccagtgcacctcccaaatccgac
tctccatactcttttggtttcaccaacccttctcctatccctcctacttcttcacctgat
cctgctttttcgtcacaatccacgcccagatccattgattcttccagttggagtgatgaa
cagaaaatattctataaagatttggagacccatacccctcaaaggccttccccagccaca
acatttatttcttctcgtgattccactactggtcttacagccagaacttcaggatttcca
aatccggagagaagatcgcctcctatatcttatgcagatgttgaagatttgggtaattct
gatcaacctgtcacgataaataatggttcatttttcaggccttctttatctcctcctaga
ctgggaagcacatcaactgttccaaggactggtcctcattctcaaattcaccagaaatct
tttccgtttaatgttcctgaagccactgtaggcaaacccatgaactccactgcttctaaa
agaacaagatcacctgcttcgtcatttgcagccaatgaaacccttgaaggaaacttaatt
tcctctgaagacaactctgaacgtgaaattttagccaaggccaagcgtttagcccggttc
aaagtagagctaagcagatctgagcaaaataatgttgatattcccgaccagaaggcattt
gctagtagatctgaacagtctgtgttggagccgaaatatgtgagggggcatttagtggat
tcagctagcaactttagcagtgcccatgttgttgctgataatgaagtcttggaaacatcc
aatgtaattattggcttatgtccagatatgtgtcctgagtcagaaaggggagagcgtgaa
agaaaaggggatcttgaccaatatgaacgtgtggatggggatagaaatgtaactagcaga
cttcttgcagttaagaagtatactagaacagctgagagggaagccagtttgatccggcct
atgcccatcctgaagaatacaattgattatctactcacattgctagatcggccttatgat
gagaggtttcttggcgtgtataacttcttgtgggataggatgagagcaattcggatggac
ctgagaatgcagcacattttcaatcaaggggctattactatgctggagcagatgataaaa
ttacatatcattgcaatgcatgaattatgtgattacactaagggagaaggattttcagag
ggctttgatgctcatctcaatattgagcagatgaacaaaacttcagttgaactgttccag
atgtatgatgatcatagaaagaaaggaatgaatattcagactgaaaaagagtttcgaggc
tattatgctcttcttaaattggataagcaccctggttataaagttgaacctgccgaactc
tcccttgaaattgctaagatgactccagagataaggcagactccagaagttctatttgcc
cgcagtgtagcaagagcatgccgaactggtaattttattgccttctttcggcttgcaaga
aaagcaacttatcttcaagcatgtctaatgcacgctcactttgcaaagttgcgtacccag
gcacttgcttctctacattctggcctacagaataaccaaggaatccctgttgctcatgtt
gccaactggcttgctatggaggatgaaagcatagagggcctcatggagtaccacggattc
ttgctaaaaatatttgaagaaccttacatggtgaaggaaggtccatttctcaatgttgat
gttgactatcccaccaagtgttcaaaacttgtgcataagaaaaggtctggaaggataatt
gaagatatttcactctcaattcaagcagaatcaccacatgttgagactatgaaagagatt
cagatgaggaagcctgaaccacaggtagcttcacctgttaaaaatgacagttctgtccag
aaccctgatgaggaaattccagacgccgtggctatttactcccctgaggtatcaagaaag
gcatttaaggatgttccagacagtccaaaagataaagatatctctggtcatcgtctgtca
ccactgagctctccttttcctaatattattcctgaacaacaacttcctagatttggtgtt
ttcaatggtaccaattcagatttgattgctagaggctctccaaatagaaactttcagttt
agtgttgaacaaaggccattggagattataccaaaaaaagctccaccggaaagttcatta
ggttttagtttttcagtgccacctcctgtgtcccacgctgtattcaaggatgagcctcta
attattcaccaagagcatgaagatgaaattaatgaatttagtgaaaattgtcaagatgaa
gaaatagcggaggccaagctgaagttgttcttaaggttatggaggaggagagcatcaaaa
ttaagaatgttacgggaagaaaggcaattagcatcaaatgctgcactagactctatgtcg
ttgggtcccccaattcaacattatatagatcgacctggcaactttgataagtttgacatt
gatatagctatgagggagagatatgaaaaacaggagaaatcatggtcaagacttaatgtt
tctgatgtagttgccagtacattaggcagaagaaatccagatgctaaatgcttgtgctgg
aaaattattctatgctctcagatgaaaactggatatgaaatggggggagcaggcacttgg
ttgacctcaaagttcatgccttcaagtgatgaagatgtggttttttcatcgcctggcttg
gtaatatggaggaaatggatttctaatcaatctgtcatcaatccttcctgctgcctctct
gtagttagggatacagcatttggtagtctagatgaggcagtatctggggcaggtgctgtt
ttgtttcttgtgtctgagaacatctcatgggagcttcagaggtctcgtcttcatactctt
ctgatgtcaattccatctggggcctgcttgcctcttctgattctatgccactcatacgat
gaaaggttctcttctgctataactaatgagctgggccttcaaaacattgataaattgaag
atcagtaagtttctgcttgtttttctgtacgaaaaccagcggatggagcacttgagcgga
tttttcagtgatacacgattaagggaaggactggaatggctggcatgtgaatcacccttg
caacccaacattggctgtgtgaaaacacgagaacttgtttacgcccatcttaattccttc
ccaggtgggcagcgcattgccatcaactccaacttggggcctaatgactgcatctcattg
ttcaatgaagccttagatcgctcaataaaggaaattactgctactgccagttcaaatccc
actggttggccttgtccagaaattggtttacttgacaagttttgtgatgaagacagagta
gtgaaaatgtgcttgccaactttgggatggagctcaaacgagaaaactgaaccaattatt
cgtgctttgcaaaactgtaagctccctacttttcctggtgatttatcctggttagccaga
ggttctaaagttggacaggagatagagcaccagagaaaacagcttgagaattgcttgatc
cagtacttgactcatactagcaagactatgggaattgctttggcaacaaaagaggcttct
gtcacaatgcaaagctgcgccaggcttgagctacgtggctcaaattaccatgtaattcct
cactggggtatgatttttcgtagaattttcaactggcgtttaatgggtttatctagcagg
gaaatctccatggcctacatctcagaacgtcatcatgttgctcttccaaatgtgagtcct
gaaacatggctttcttattatccagacacttctttagatgaaataatcagtgtgagctgc
aactctcctcttcccgttaagcatcaaccacttcaacgtcttccgaggatggtttcaaat
gatgtattccaaggaactgttaaccagacagattctgaaaacaatcttccgcttgataaa
tcacctaccatggattcagctacaacattttctaatgccaaaccaaatacagaagctgac
aaattaagcaagctattggaccattgtaacttgctgcaggatagcatagataagaagctt
tttttatactactaa
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