Vigna umbellata (ricebean): 124847608
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Entry
124847608 CDS
T09662
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
vum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124847608
03015 mRNA surveillance pathway
124847608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124847608
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124847608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
DUF5388
Motif
Other DBs
NCBI-GeneID:
124847608
NCBI-ProteinID:
XP_047181094
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MGAVKLNIRNCSQRVDGVAAEPEPDWSFDDLVSELNDLETKLANTTSSTERSVPFEKSRT
RGREIEKGRAFVLRADEYEMEDSESEDDDHVDKALVVAGSAKRFTCDELYLSNSDDDSDI
VSGFEVRPCLMDELGEVEGALFELAQEHQLKVKDEIRNKISALETALVNETQNSASSLLR
VEKYKETRQELDKKFDTQYQRRIAEALDNHLTAVQRDRELKSQIEERKIRSDAAYEEAKR
KAAFEKLQQEKARAEAEAKVRAAEEAKREAERKAAMEARKQAAMEAEKKAAKEANETSKR
VTSGGTQQAAGDSTDTSNLSNAENKEYGNLYRAAPSALNLEQGRLQKLKELCERNQMIRS
SSNKDYTRHEGNISRNIRQIRGVRDNVRSKASELIKLLNDPQCPQSVSIEIFAKKVVSYC
ENPGNAPFASAYVIVLITSQIPHAMDILLAELHMACLYTVPKHLLYKKSAFQSKEAYFRS
IGYREVDGKLESTEDYLKRLESYMKVYGALVQTETTNVQNFHGLPEGWAWLARFLNTLPA
NHYTAVSLNAFLQMAGFALFKRYKSQFLKMLNVVSENFLVDLKSRNVPELTKTITEIQTY
IEDKKFLQEPEGKSLQSNLLSNVYVNY
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgtgaaattgaatattcgtaattgttcgcagagagtggatggcgttgccgcc
gagccggaacctgattggagctttgacgatcttgtttcggaactcaacgatttggagacg
aagctcgctaatactacttcttccaccgaacgctctgtacctttcgaaaaatcaagaact
cgtgggagagaaatcgagaaagggagagctttcgtattgcgagccgatgagtatgagatg
gaggactcggagagtgaggatgatgatcatgtagacaaggcattggtagtagctggcagt
gccaaacggttcacttgtgatgaactttatctgagtaacagtgatgacgattcggacatt
gtttctggttttgaagtgcggccttgcttgatggatgaattgggagaggtagaaggtgcc
ttgtttgagttggcgcaggagcaccagcttaaggttaaggatgaaattaggaataagatt
tcggcattggagacagctttggtgaatgaaactcagaattctgcttcttctctccttcga
gttgagaaatataaagaaacaaggcaggaattggataaaaagtttgacactcaatatcag
cgtaggattgcagaagcacttgataatcacttgacagctgttcaacgggaccgtgaactc
aaatcacaaatagaagaaaggaaaataagaagtgatgcagcttatgaagaggccaagaga
aaggctgcttttgaaaagctgcagcaagaaaaggctagagctgaagcagaggccaaagtt
agagctgctgaggaagcaaaacgagaagctgagagaaaagcagcaatggaagccagaaaa
caggcagcaatggaagctgaaaagaaagctgcaaaggaagccaatgaaacttccaaaagg
gttacttctggagggacccaacaagccgctggggattcaacagatacatcaaacctatcc
aatgctgaaaacaaggaatatggtaatttatatcgagctgcaccaagtgctttgaatcta
gaacaggggagactgcagaaattgaaagagctatgtgagagaaaccaaatgataagatca
agttctaataaggattacactcggcatgagggtaatatttcccggaatataaggcaaata
aggggtgtaagagacaatgtcaggtcaaaagccagcgaactgattaaacttttgaatgat
cctcaatgtcctcaatcagtcagcattgagatatttgctaaaaaggttgtttcgtactgt
gaaaaccccgggaatgctccctttgccagtgcctatgtcatcgttcttattacatctcag
attccacacgcaatggatattttgcttgctgagcttcacatggcttgcctttataccgtt
ccaaagcacctgctttacaagaagtccgcctttcaatcaaaggaggcatacttcagaagt
attggttatcgagaagtggacggaaagttggagagtacagaagattatttaaagcggtta
gaatcatacatgaaggtgtatggtgcactggttcagactgaaactacgaacgttcaaaat
ttccacggcttgccagaaggttgggcgtggctcgcaaggttcttgaacacactcccagca
aatcattacacagctgtttcgctcaatgcattcttgcaaatggcaggatttgctctcttt
aaaagatataaatcacaattcttaaagatgctgaatgtcgtctctgagaactttttagtt
gatttgaaatcacggaatgtaccagaattgacgaagacgattacggagatacagacttat
atagaagataagaagttccttcaagagccagaaggaaagagtctgcagtctaatttgtta
tctaatgtgtatgttaattattga
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