Vigna umbellata (ricebean): 124847618
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Entry
124847618 CDS
T09662
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124847618
Enzymes [BR:
vum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124847618
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124847618
NCBI-ProteinID:
XP_047181113
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All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MEILILLSFMLLFLLLVPSCICSSPLQDPELVVEDVQKSIKASRRNLAFLSCGTGNPIDD
CWRCDANWEKNRKNLAECSIGFGKHAIGGRDGKIYVVTDPGDHAVNPKPGTLRYGVIQEE
PMWIIFQRDMVIKLKQELMMNSFKTIDGRGVSVHIAGGPCITIQYVSNIIIHGINIHDCK
QGGNAYVRESPTHYGWRTLSDGDGISIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITIS
NNFFTHHNKVMLLGHSDTFTRDKNMQVTIAFNHFGEGLVQRMPRCRYGYFHVVNNDYTQW
KMYAIGGSSAPTINSQGNRFFASNDHTFKEVTKRENAAQSQWKSWNWRSTGDLMLNGAFF
TASGAGASSSYARASSLAAKPSSLVSSLTATAGSLRCRKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggaaattctaattctgctgtcatttatgttactctttctgctgcttgtaccttcctgc
atttgttcttccccacttcaagatcctgaactagtggtggaagatgtacaaaagagcatt
aaagcctcaaggaggaacttagcatttctctcttgtgggacggggaaccccattgatgat
tgttggaggtgtgatgccaattgggaaaagaatcggaagaatttagcagagtgttccatt
gggtttggtaagcatgcaattggagggagggatggtaaaatatatgtggtgactgaccct
ggtgatcacgctgtgaatcccaagccaggaacactgagatatggtgtgatccaagaggaa
ccaatgtggatcattttccagcgtgacatggtgatcaagctgaagcaagagcttatgatg
aactctttcaagaccatagatggtagaggggtaagtgtgcacattgccggtggcccttgc
attactatacagtatgtgagcaacattatcattcatgggattaacatccatgactgcaag
caaggagggaatgcctatgtgagagaatcccctacacactatgggtggaggactctctca
gatggtgatggcatctcaatctttggtgggagccatgtttgggtggatcactgttctctc
tccaattgccgtgatggactgattgatgccatccatggatccactgccattaccatatcc
aacaatttctttacccaccacaacaaggtcatgcttttgggccacagtgatactttcact
agggacaagaacatgcaagtcaccattgcctttaaccattttggagaagggctagtacag
agaatgccaagatgtaggtatggatacttccatgtggtgaacaatgattacacccaatgg
aaaatgtatgccataggagggagttctgccccaacaatcaatagccaagggaatagattt
tttgcttctaatgaccataccttcaaagaggtgacaaagagggagaatgcagcacagagc
caatggaagagttggaattggaggtcaacgggagatttgatgctaaacggtgcgtttttc
actgcatcaggagcaggtgcatcttcaagctatgcaagagcttccagtttggcagcaaaa
ccatcttcactcgtcagttctttaacagcaacagctggatcacttagatgtagaaagggt
tcacgttgctga
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