Vigna umbellata (ricebean): 124847878
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Entry
124847878 CDS
T09662
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124847878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124847878
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
124847878
Prokaryotic type
Archaeal type
TFB
124847878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
zf_Tbcl_2
DUF7573
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
124847878
NCBI-ProteinID:
XP_047181423
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSDAFCSDCKKQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG
GPSNPLLTDGGLSTVIAKPNGSGGEFLSSSLGRWQNRGSNPDRALILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPNWY
AKEEDLRSLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgcgttctgcagcgactgcaagaagcagacggaggttgtgttcgaccactcc
gccggcgacaccgtctgctccgagtgcggcctcgtcctcgagtcccactccatcgacgag
acctccgagtggcgtaccttcgccaacgagtcgggcgataacgaccccaaccgtgtcggc
ggtccctctaaccctcttctcaccgacggcggcctgtctaccgtcatcgccaagcccaac
ggctccggcggcgagttcctctcctcctccctcggccgctggcagaaccgcggttccaac
cccgatcgcgccctcatcctggctttcaagaccatcgccaccatgtccgacaggttggga
ctggttgcgaccatcaaggatcgggctaatgagatatataagagggttgaagatcaaaag
tctagtagaggaagaaatcaggatgctttattggctgcttgtctctacattgcttgccga
caagaagacaaacctcgtactgttaaggaaatttgctctgttgccaatggggccacaaag
aaggaaattggccgagcaaaagagtacatagtaaaacagctgggtttggagaatggtcag
tctgtggagatgggtacaatacatgcaggggactttatgaggcgattctgttctaatctt
ggtatgaataatcaagctgttaaagctgctcaggaagctgtgcagaaatcagaagaattt
gatataaggaggagtcccatatcaattgctgcagcagttatatatatcataactcagctt
tctgatgataagaagcctcttaaagatatatcaattgccacaggcgttgctgaaggaacg
attaggaactcctacaaggatctttacccccatgtttcaaaaataataccaaattggtat
gcgaaggaggaggatttaaggagcctttgcagcccttga
DBGET
integrated database retrieval system
