Vigna umbellata (ricebean): 124847966
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Entry
124847966 CDS
T09662
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Module
vum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124847966
Enzymes [BR:
vum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
124847966
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pel9A-like_beta_helix
DUF4083
Motif
Other DBs
NCBI-GeneID:
124847966
NCBI-ProteinID:
XP_047181516
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MQRLIIIFLLILGFVSPCLCVRSTVIKEKNTYNVIDYGAHGDGKSDDSRAFESAWKDTCG
TKGTPTLIIPQKGAFLLKGIALNGPCIATKVNIKLQGKIVAPSKDEWVKGRSNLIEITNV
TNLSIDGSGGSIDGYGSSWWQCQPCGRPTILRFKFCNDLSVTHVTITNSPKAHIRINNCE
NATFSNISIDSPGNSYNTDGIDIFASKHILIEDSTIQCGDDCIAISDGSSYINATRIACG
PGHGISIGSLGRDGSFETVSEVYVKNCNLTNTTNGARIKTAPGGSGYARQITFEDIRLMN
VMNPIIIDQTYGSKISKDKGLNVSDVTFRGFRGTSASDEAITLNCGLPGCSNIVLDDIDI
VSSEPGKRVSCSCNNARGRVTSTDPKCSFSNKRINV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagattaataataatttttcttttgattcttggttttgtttcaccatgtttgtgt
gtaaggtcgactgttataaaagagaaaaacacttataatgtgatagattatggtgctcat
ggtgatggcaagtcagatgattccagggcttttgagagtgcatggaaagatacatgtgga
acaaaaggaacaccaactcttattataccacaaaaaggagcattcttgctgaaaggcata
gccctcaatggtccttgcattgccacaaaagttaatattaagcttcaaggaaaaattgtt
gcacctagcaaagatgaatgggtaaaaggtagaagtaatttgattgaaatcacaaacgta
actaatctctcaattgatgggagtggaggatcgatcgatggttatggttcttcttggtgg
caatgccaaccatgtggaagaccaacgattcttagattcaagttttgtaatgatcttagt
gttactcacgtgaccatcaccaacagcccaaaagctcacataaggataaataattgtgag
aatgccacattctctaatatcagcattgattctcctggtaacagttacaacactgatgga
attgacatttttgcttcaaaacatatcttgattgaagattccaccatacaatgtggtgat
gactgcatagccatcagcgatggctcctcttacatcaatgctactcgaattgcttgtgga
ccaggccatggaataagcattggcagcctgggaagagacggatcttttgaaacagtgtca
gaagtttatgtaaaaaattgcaacctcaccaacactacaaatggagcaagaatcaagaca
gcaccaggtggatcaggttatgcaagacagataacttttgaggacatcagattaatgaac
gttatgaacccaattattatagaccagacctacggcagtaaaatttcgaaggacaaagga
ttgaacgtgagtgatgtgacatttcgtggattcagaggaacatcagcaagtgacgaagct
attactctgaattgtggtctacctggttgttccaacattgttctggatgatattgacatt
gtctcttctgaaccaggaaaacgagtttcttgttcttgcaacaatgcccgtggaagagtt
acatccactgatccaaaatgttctttctcgaataaacgaataaatgtgtag
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