Vigna umbellata (ricebean): 124848379
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Entry
124848379 CDS
T09662
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
124848379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vum04040
]
124848379
Ion channels [BR:
vum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124848379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
124848379
NCBI-ProteinID:
XP_047181991
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MANFERDEVAILSDCHPQASVEVLDSGFPRHVSRTRSVSISIPATLTEPYERDTNLVGYT
GPLRIQRITQMSGPLHVTNRPGNLFRQNKVVPQSQAEESKTENFSSCCGIMGENDLQNYA
CKNEHLVRSGPLGMCIDPYCTTCPTYFKAIQKSSSNASGIFNHEFRNTLYDDAKNWARRL
FTFLIPHVPRVINPHNKLVQQWKQFFVICCLVAIFVDPLFFFLLSVQKNNKCIVIDWAFT
KLLVALRSMNDFIHFLNIVLQFRLAYVAPESRVVGAGELVDHPKKIALHYFKTSFFIDLF
VVLPLPQIFILFVLPTHLGTGSTGANYANNLLRIVILVQHIPRLCRFLPMIFSPAGFVFE
SPWANFFINLSTFVLSGHVVGSWWYLFSLQRVNQCLREACDTTHITGCTKFIDCGHGITE
AYQHNNSWHNWRNNTFANACFTEDGFRDGYGIFIKAVNLTAHPNLSTRYFYSSFWGFQQI
STLTGNLIPSYFVPEILFTKAILASGLLLFALLIGNIQNILQALGRRKLEMSLRRRDVEQ
WMSHRRLGDDLRRRVRQAERYNWAATRGVNEEMLLENLPEDLQREIRRHLFTFIKKVRIF
ALLDEPILDAICERLRQKTYIKGSKILYDCGLVEKMVFIVRGKLESVGEDGISAPLYEGS
VCGEELLTWCLEHSLASKGCRKARIPRQKLVSNRRVICLTNVEAFSLRAADLEEVTGLFA
RFFRNPRVQGAIRYESPYWRCFAATSIQVAWKYRMKCLRRAKTT
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggctaattttgagagagacgaggtggcaattctatcagattgtcatcctcaagcatca
gttgaagtccttgattctggattcccaaggcatgtatctaggactcgaagtgtatcaatt
tctattcccgcgacactcacagagccatatgaaagagatactaatcttgtgggatacact
ggtcccctacggattcagagaataactcagatgagtggtccattacatgttactaataga
cctggaaacctttttcggcagaataaagtggtaccccagtcacaagcagaagaaagtaag
acagaaaatttttcttcatgctgtggcatcatgggtgaaaatgatttgcagaactatgct
tgcaagaatgaacatttagtcaggtccggtccactgggaatgtgtattgatccatattgt
acaacgtgcccaacttacttcaaggctattcagaaaagtagttcaaatgcttcgggtata
tttaatcatgagtttcggaatactctttacgacgatgccaagaattgggcgagaagactt
tttactttcttgattccccatgttcctagagttatcaatcctcataataaacttgtacaa
caatggaaacaattttttgtaatatgttgcttggtggcaatttttgtggatccgttattc
ttcttcttgctctctgtgcagaagaataataagtgtattgttatagactgggcttttaca
aaacttcttgttgcacttagaagcatgaatgatttcattcacttcctaaacattgttctt
cagtttaggttggcttatgtggctcctgagtctagggtggttggtgctggggagttagtt
gaccatccaaagaaaatagctcttcattactttaagacatcttttttcattgacttattt
gttgttcttccacttcctcagatattcatattgtttgtcctaccaacacacttagggaca
gggtcaacaggagcaaactatgcaaataaccttttgcgcattgtgatcctcgtccagcat
atccctagactatgtagatttcttcctatgatattttctccagctggattcgtatttgag
tctccgtgggcaaatttctttataaatctttctacctttgtactgtctggacatgttgtt
ggatcctggtggtacctcttcagtttacagagggttaatcagtgtctacgagaggcctgt
gataccacacatattacaggatgcacaaaattcattgattgtggacatggaataactgaa
gcatatcaacataacaatagttggcataattggaggaacaatacttttgcaaatgcttgt
tttactgaagatggttttcgtgatggttatggcatctttattaaagctgtcaaccttacc
gcacatcctaatttatctactagatatttctattcatcattttggggatttcagcaaatt
agtacactgactgggaatttaatccctagctattttgttcccgaaatcctttttactaag
gccattcttgcgtcaggactgttgctgtttgctcttctcattggaaacatacagaatatt
cttcaggctcttggacgcaggaagctagagatgtcacttaggcgacgtgatgttgagcaa
tggatgagccaccggcgcttaggagatgatctaagaaggagagtgcgacaggctgaacga
tataactgggctgcaacaaggggggtgaatgaagaaatgctcctggagaatttgccagaa
gacctccaaagggaaattagacgtcatctcttcacatttattaagaaagttcgaattttt
gccttactggatgagcctatcttggatgccatatgtgagaggctaaggcagaaaacatat
atcaaaggaagcaaaattttgtatgattgtggtttggtagagaagatggtttttattgtg
cgtggaaaattggagagcgttggcgaagatggaatcagtgctcccctttatgaagggagt
gtctgtggtgaagaacttctgacatggtgtcttgagcattccttagcaagcaaaggttgc
agaaaagcaaggattccaaggcaaaagctggttagtaacagaagagtaatatgcttaaca
aatgtggaggcattttcccttagagcagcagaccttgaagaagttacaggcctatttgca
agattctttaggaatccccgtgttcaaggagccataaggtatgaatcaccttattggaga
tgctttgcagcaacaagcattcaggttgcatggaaatacagaatgaaatgtctccgtcgt
gctaaaactacataa
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