Vigna umbellata (ricebean): 124848402
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Entry
124848402 CDS
T09662
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03420
Nucleotide excision repair
vum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124848402
09124 Replication and repair
03420 Nucleotide excision repair
124848402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124848402
03400 DNA repair and recombination proteins [BR:
vum03400
]
124848402
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
124848402
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124848402
TCR (transcription coupled repair) factors
Cul4-CSA complex
124848402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_2nd
Lgl_C
Motif
Other DBs
NCBI-GeneID:
124848402
NCBI-ProteinID:
XP_047182023
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
ICSQIGDYHYTLIQVLLATGGGHLVYLEIGDGILHEVKHAQLEYEISCLDINPIGENPNH
SHLAAVGMWTDISVRVFSLPDLNLVTKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLL
NFMLNTNTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVN
LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRT
FAICSLKYNPTGGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDDNNVYYC
VGTAYVLPEENEPTKGRILVFTVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAINQKIQL
YKWVLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA
RDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFINR
FRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGG
LSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLNRSRMDEISKAMDVSVEELCKRVEELT
RLH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atttgcagtcaaattggtgactatcattacaccttgatacaggttttgttggccacagga
ggagggcatttggtttaccttgaaattggagatggaatattgcatgaagtaaaacatgcc
caactggagtatgagatttcatgtttagacatcaatcccattggtgaaaaccccaatcat
agtcatcttgcagctgttggaatgtggacagacataagtgttagggttttttctcttcct
gatctgaatctcgtcacaaaggaacagctaggaggggaaatcatacctcgttctgttctt
ctttgtgcttttgaagggatatcttacttgctatgtgcccttggtgatggacatctctta
aacttcatgctgaacacaaatactggcgagttaacagataggaaaaaggtatctcttggg
acacagcccattacactacggacgttctcctccaagaatactacccatgtatttgctgca
tctgatcggccgactgtgatctatagtagtaacaaaaaattactttatagtaatgtaaat
ctgaaggaagtgagtcatatgtgtcctttcaattctgctgcttttccagacagtttggca
attgcgaaagaaggtgagcttactattggcaccattgatgacatacaaaaactacatata
cgctccattccgcttggagagcatgctcggcgtatctgccaccaggagcaatctaggact
tttgctatttgtagtttgaaatacaacccaacgggtggtgaagactctgaaatgcacttt
gtccgtttactggatgaccagacttttgagttcatatcaacttattctcttgacacatat
gagtatggttgctttataattagctgctcattctcagatgataataatgtttattactgt
gttggaactgcttatgtgttgccagaggaaaatgaaccaacaaaaggtagaattcttgtt
tttactgttgaagatggaaaactacagctaattgctgagaaggagacaaaaggagctgtt
tattgcttgaatgcatttaatggtaaattacttgctgctattaatcaaaaaatccagctg
tacaagtgggtgctacgtgatgatggaacccacgaattgcagtctgaatgtggacatcat
ggacacatcctagctctttatgtgcaaactagaggagattttattgtagtaggtgatctg
atgaagtcaatttccttgttaatctataagcatgaagaaggtgctattgaggaaagagct
cgtgactacaatgcaaattggatgtcggctgttgaaatccttgacgatgacatttacctt
ggtgcagaaaataattttaatctgttcactgttcggaaaaatagtgaaggtgctactgac
gaagagcggggtcgtcttgaagtggttggtgagtatcaccttggagaatttattaatcgg
ttccggcatggctccctcgttatgcgcttgccagattctgatgttgggcagattccaaca
gttatctttggtaccattaatggtgttattggggtaattgcttctcttccgcacgagcaa
tatgttttcttggagaaacttcagtcaaatttgaggaaggtaattaaaggtgttggagga
ctcagccatgagcaatggaggtcgtttaacaatgagaagaaaactgttgaagccagaaac
tttttggatggagatttgattgaatcatttctggatctcaaccgcagtaggatggatgaa
atttccaaggcaatggatgtttctgtagaggagttatgcaaaagagtggaagagttgacc
aggttgcactga
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integrated database retrieval system
