Vigna umbellata (ricebean): 124849127
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Entry
124849127 CDS
T09662
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Module
vum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124849127
Enzymes [BR:
vum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
124849127
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
124849127
NCBI-ProteinID:
XP_047182959
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All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MANPTPKPSPILVLHVILCCWLCSSIVMGATYNVVNFGAKSDGKTDSTKAFLNAWAKACA
STSSASIYVPRGRFLLRSATFGGQCHNQAITFTIDGTLVAPSDYRVIGSSGKWLQFEGVN
GVSIRGGVLDGQGTALWNCKNSGKGNCPTGATTLGFTNSNNVAISGLTSLNSQMFHIVFN
GCQNVKLQGVKVMADGNSPNTDGIHVQMSSHVTILNSNIRTGDDCISIGPGTTNLWIENI
ACGPGHGISIGSLGKDFKEAGVQNVTVKTVTFTGTQNGVRIKTWGRPSNGFVRNVLFQDA
IMVNVENPVIIDQNYCPGNKGCPGQASGVKVSDVTYKNIHGTSATQVAVKFDCSSKYPCR
GIKLEDVKLTYKNQRAVSSCNHADGASLGSVQPQSCF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacccaacaccaaaacctagtcccattctcgtccttcatgtcatcctatgttgc
tggttgtgttcgtccattgttatgggagccacttacaatgtggtcaactttggtgccaaa
tcagacggtaaaacggactcaaccaaggcgttcctcaatgcatgggccaaggcttgtgct
tcaaccagctctgcctccatttatgtgccacgaggaaggttcttgctcagaagtgccacc
tttggtggccaatgtcacaaccaagctatcacctttaccattgatggcactctggtcgct
ccttctgattacagggtcatcggtagttccggtaagtggttgcagttcgagggtgtgaat
ggggtttccatccgcggtggggtgttggatggccaaggaacagccctgtggaattgcaag
aactccggcaaaggaaactgccccaccggtgccacgacgttgggtttcaccaactcgaat
aacgtcgctattagtgggttgacctcgttgaacagtcaaatgttccacattgtgttcaat
ggatgccaaaatgtgaagttgcaaggagtgaaggtcatggcggacggaaacagccctaac
accgacggcatccacgtacaaatgtcctctcacgtcaccatcctcaactccaatattcga
acaggagatgattgtatctccataggtccaggaaccacaaacttgtggattgaaaacatt
gcatgcggaccaggacacggaataagcattgggagcttggggaaagatttcaaagaagct
ggtgtacaaaatgtgactgttaaaacggttaccttcaccgggactcaaaatggcgtcaga
atcaagacctgggggagacccagtaacggctttgtgaggaatgttcttttccaagacgct
atcatggtcaatgtcgaaaaccccgttataattgaccaaaattactgcccaggaaacaag
ggctgccctggtcaggcatctggagtgaaagtgagtgatgtgacgtacaaaaacattcat
ggaacatctgctacacaagttgctgtgaaatttgattgcagttccaagtatccatgcaga
gggatcaagttggaggatgtgaagctcacatacaagaaccaacgtgctgtatcttcctgc
aaccatgctgatggagcctcgctgggctcagttcaaccccagagttgcttttag
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