Vigna unguiculata (cowpea): 114162174
Help
Entry
114162174 CDS
T06017
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03030
DNA replication
vun03410
Base excision repair
vun03420
Nucleotide excision repair
vun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114162174
03410 Base excision repair
114162174
03420 Nucleotide excision repair
114162174
03430 Mismatch repair
114162174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vun03032
]
114162174
03036 Chromosome and associated proteins [BR:
vun03036
]
114162174
03400 DNA repair and recombination proteins [BR:
vun03400
]
114162174
DNA replication proteins [BR:
vun03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114162174
DNA Replication Termination Factors
ELG1-RFC complex
114162174
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114162174
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114162174
Check point factors
HRAD17(Rad24)-RFC complex
114162174
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
Rad17
AAA_16
RuvB_N
Mg_chelatase
ResIII
DEAD
AAA_11
SLFN-g3_helicase
AAA_14
AAA_5
AAA_24
ADK
AAA_assoc_2
nSTAND3
nSTAND_NTPase5
AAA_2
AAA_18
AAA_28
AAA_30
ATPase_2
Effector_1
AAA_7
AAA_19
PhoH
RNA_helicase
TIP49
AAA_25
AAA_17
NPHP3_N
NB-ARC
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
114162174
NCBI-ProteinID:
XP_027901770
LinkDB
All DBs
Position
9:33026178..33031956
Genome browser
AA seq
338 aa
AA seq
DB search
MQSSQQWVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAR
QLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTSKRKNGYLCPPFKIIVLDEA
DSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEVIMSSRIL
YICKEEGLYLDTAALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPEKV
VEAVLQACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLG
EADKCLVDGADEYLQLLAVVSNTMKAFSNIPEEFAYEC
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctctcagcaatgggtcgagaaataccgaccgaggcaagtgaaagatgttgcg
taccaagaggaagttattcgagttctaacaaatacacttgaaactggaagttgcccccac
atgctcttctatggtcctcccggcactggaaaaacaactactgcccttgcaattgcccgt
cagcttttcgggcctgagctctacaagtctagggtgctggagctgaatgcaagtgatgat
agagggattaatgttgttcgtacaaaaataaaagattttgctgctgtggctgttggtact
tctaagcgtaagaatggttatctttgtcctccatttaagattattgttctagatgaggct
gattcaatgacagaagatgctcagaatgccctgaggcgtacaatggaaacgtactctaaa
gttacaaggttcttttttatatgcaactatgtgagcaggattatagaaccgcttgcttca
aggtgtgcaaaattcaggttcaagccattgtcagaagtaatcatgagcagccggatattg
tacatatgcaaagaagagggactctatcttgatactgcggctctttcaacccttagttct
atttctcatggagatcttcgccgggcaatcacatacttgcagtctgcagctcgcttattt
ggatcttcaatttcttcagagaatctgatttctgtgtctggggttgttccagaaaaagtt
gtggaggcagttcttcaagcttgcagaagtggtaattttgatttcgcaaacaaggaagtc
aacaatttcattgcagagggatatccagcttctcaaatgcttactcagttatttgaagcc
attgttgaagaaaatgatctatcagatgaacagaaagcaagaatatccaagaagctgggt
gaagctgataagtgtctagttgacggtgctgatgaatacttgcaacttcttgctgtggtc
agcaatacaatgaaggcttttagcaacatcccagaagaatttgcttacgagtgttag
DBGET
integrated database retrieval system