Vigna unguiculata (cowpea): 114162609
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Entry
114162609 CDS
T06017
Name
(RefSeq) probable small nuclear ribonucleoprotein F isoform X1
KO
K11098
small nuclear ribonucleoprotein F
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114162609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114162609
03041 Spliceosome [BR:
vun03041
]
114162609
03032 DNA replication proteins [BR:
vun03032
]
114162609
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
114162609
Spliceosome [BR:
vun03041
]
Complex A
U1 snRNP components
Sm proteins
114162609
U2 snRNP components
114162609
Complex B
U1 snRNP components
114162609
U4/U6.U5 tri-snRNP components
114162609
Complex C
U2 snRNP components
114162609
DNA replication proteins [BR:
vun03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
114162609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Big_15
Motif
Other DBs
NCBI-GeneID:
114162609
NCBI-ProteinID:
XP_027902353
LinkDB
All DBs
Position
9:complement(34696255..34699056)
Genome browser
AA seq
88 aa
AA seq
DB search
MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL
GEILIRCNNVLYLRGVPEDEEIEEAAED
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctactataccagttaatcccaagcctttcttgaataatttgaccgggaaaccagta
attgtgaaactcaagtggggaatggagtacaaggggtatctcgtttctgttgattcgtat
atgaacttgcagctggcaaacactgaggagtacattgagggacagtttactggaaatttg
ggagaaattttaatcagatgtaacaatgttctctaccttcgaggagtcccagaggatgaa
gaaatcgaagaagccgcagaagactag
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