Vigna unguiculata (cowpea): 114162938
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Entry
114162938 CDS
T06017
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
114162938
Enzymes [BR:
vun01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
114162938
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
NOMO1-like_2nd
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
114162938
NCBI-ProteinID:
XP_027902755
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Position
9:complement(35908616..35912804)
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AA seq
643 aa
AA seq
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MPLLGVQLTIQDNHVVMENGILTLTLSNPGGIVTGIQYNNIDNLLEVLNDESNRGYWDLV
WSSPTSTGTSGTFDVIKGTKFQVMVENEDQVEVSFTRTWDVSLEGKLVPLNIDKRFIMLR
GCSGFYSYAIYEHLQEWPAFNLDETRLAFKLRKDKFHYMAMADNRQRNMPLPDDRLAPKG
KALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDNKVHGWICMDPAVGFWLITPTDEFR
SGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFNAGEAWKKVFGPVFIYLNSSYDGGD
PLMLWDDAKQQMLVEVQSWPYSFPESEDFAKWDERGNVSGRLLVRERCINDDYISAKGAY
VGLAPPGDVGSWQRECKNYQFWAKADDDGYFTITNVLAGDYNVYAWVPGFIGDYKYDVVM
NITEGCDIDLGELVYEPPRDGPTVWEIGIPDRTAAEFYVPDPNPKYINKLYVNHPDKFRQ
YGLWERYAELYPDKDLIYTIGVSDYTKDWFFAQVTRKKDDNTFQGTTWQIKFQLDKVNTT
SSYKLRVALASATLSELQVRVNNPKSPRPLFSSGLIGRDNSIARHGIHGLYWLYSVDIAG
TQFVEGDNTIFLTQSRGNSPFQAIMYDYIRLEAPPSSNINNTK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgccgttactgggggtgcaacttactattcaagataatcatgtggtgatggaaaatggc
atactaacactcactttatcaaatcctggaggaatcgtgactggaatacagtacaataac
atcgacaacttgcttgaagttttgaatgacgaatctaacagagggtattgggaccttgtt
tggagctcaccgacaagtacaggaaccagtggtacatttgatgtcatcaaaggaacaaag
ttccaagttatggttgaaaatgaggaccaagttgaggtatccttcaccaggacgtgggac
gtctctctagagggcaagttggtacctttaaacattgacaaaaggttcataatgcttcgt
ggttgttcgggcttctactcctatgcaatttatgagcacttacaggagtggcctgctttc
aatcttgacgaaacaagacttgctttcaagctcagaaaagacaagttccattacatggcc
atggctgataatagacaaagaaacatgcctcttccagatgacagattagcacctaagggg
aaagcccttgcctacccagaagctgttctacttgttaatcccatcgaaccagagcttaag
ggagaggtggatgacaagtaccaatattcatgcgacaacaaagacaacaaagttcatgga
tggatctgcatggatcctgcagtggggttctggcttattacgcccaccgatgagtttcga
tctggtgggcccctcaaacaaaacttaacttctcatgttggccccaccacgcttgccgtg
tttctgagtgcacattattctggagaggatttggtgcctaagtttaatgctggtgaggca
tggaagaaagtttttggtcctgttttcatttatttgaattcttcctatgatggaggtgac
ccccttatgctatgggacgatgctaaacaacagatgttggtggaagttcaaagctggccc
tacagtttccctgaatcggaggattttgcgaagtgggacgaacgtggtaatgttagtggc
aggcttttggttagagagaggtgtataaacgatgactatatctcagcaaaaggtgcttat
gttggcttggctcctccaggcgatgtgggatcatggcaacgagaatgcaagaattaccag
ttttgggctaaagcagacgatgatggctacttcaccatcaccaatgtacttgcaggagat
tacaatgtttacgcctgggtgcctggttttattggtgactataaatatgacgtagttatg
aacataacagaaggctgtgacatcgaccttggtgagcttgtgtatgaacctcctagagat
ggtccaacagtgtgggaaattggcattcccgatcgaacagctgctgagttctatgttccc
gacccaaatcccaaatatatcaacaaactctatgttaatcatccagacaagtttagacaa
tatggattgtgggagagatacgcagaactctaccctgacaaagacctgatctacacaatt
ggtgtgagtgactacaccaaagattggttctttgctcaagttaccaggaagaaagatgac
aacacattccaaggaaccacatggcagatcaagtttcagctcgataaggtgaacacaacc
agtagctataaacttcgggtggctttggcatcagcaacactatctgaacttcaggttcga
gttaataatccaaagagtcctcgtcctctattttcaagtgggttgataggaagggataac
tcgatcgcaaggcatggaattcatggactttattggctttacagtgtagacattgcagga
actcaatttgttgaaggagataataccatctttttaacacagagcagaggaaatagtcca
tttcaggcaattatgtatgattatattcgtctggaagctccaccatcatctaatatcaat
aacacaaagtga
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