Vigna unguiculata (cowpea): 114163209
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Entry
114163209 CDS
T06017
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vun04121
]
114163209
Ubiquitin system [BR:
vun04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114163209
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SCAP
TPR_2
TPR_19
Motif
Other DBs
NCBI-GeneID:
114163209
NCBI-ProteinID:
XP_027903175
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Position
9:complement(35710390..35722562)
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AA seq
764 aa
AA seq
DB search
MDSVPFRDGNIHAILDSRYLNSPLDVNHTLQTHSSLIRRLSQERELEGHLGCVNAVAWNS
KGTLLISGSDDTRINIWSYSGRKLLHSIDTGHTANIFCTKFIPETSDELVASGAGDAEVR
LFNLSRLSGSGSSDNSIIAPSALYQCHARRVKKLAVENGNPNVVWSASEDGTLRQHDFRE
GTSCPPAGSSHQECRNILLDLRSGSKRSLADPPKQVLSLKSCDISSTRPHLLLVGGSDAF
ARLYDRRMLPPLSSCRKRMSPPPCVNYFCPMHLSDRGHPSLHLTHVTFSPDGHEVLLSYS
GEHAYLMNVNHAGVNEMQYTSGDVSKMMTYSPIVNGIELQSCVSNVFPNGFPIKKNIAAK
LDKCRKLIKYAKKSLDNGTPYYGIEACNEVLNGYSHIIGSALKHECLCTRAALLIKRDWK
NDAHMAIRDCYAARKIDNSSYKALFYMSEALSQLGRHEDALDFAEASQSLAPHKSEVAER
VENVKKDIALAEAEKNNKANDGASRSDIRGGRILSLSDILYRPEANGDVPQDGPRSDRDD
SDYDEELELDFETSMSGDEAQDLDSNILHGSLNVRIHRRGDSRDNAGASAPSDSPSSSSQ
SSRACYLPEPAVDMKQRFIGHCNIGTDIKQANFLGQRGEYVASGSDDGRWFIWEKRTGRL
IKILNGDGSVVNCIQCHPFDFVVATSGIDSTIKIWTPSAPVPSSVAGGSAGPETGDVLSA
MESNQQKLSRSRNSILPFELLEPFRMHDFPEGSLRLRPFECAQS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggattccgtcccgttccgcgatggcaacattcacgcgattcttgactctcgatatctc
aactcgccactggatgttaatcacactttgcagactcattcctctctcatccggaggctt
tctcaagagagagagttagagggccaccttggctgtgtcaatgcggtggcttggaattcg
aaaggtacattgttgatatccggatcagatgatactcggatcaatatttggagctattct
ggccgtaaacttctacattcaattgacacaggacatacagcaaatatattctgtactaag
tttataccagaaacttctgatgagcttgtagcctctggagctggagatgctgaagtccgg
ttatttaacttgtctcgcttaagtgggagtggatctagcgacaattcaatcattgctcca
tctgcactttaccaatgccatgctcgaagagtcaagaaattggctgttgaaaatggcaac
cctaatgtagtatggagtgctagtgaagatgggaccttgagacaacatgattttcgggaa
ggtacctcttgtcctccagctgggtcttcacaccaagagtgtcgaaatattcttcttgac
ttacgaagtggttctaaaagatcacttgctgatcctcctaaacaagtcctttctttaaag
tcttgtgatattagttcaactaggccgcatttgctccttgttggtgggagtgatgccttt
gcacgcttatatgatagaaggatgttgccacctctaagctcatgtcgaaaaagaatgtct
cctcctccttgtgttaattatttttgtccaatgcatctttcggatcgtggacatccaagc
ttacacttaactcatgttacattcagtcctgatggacatgaggttctcctcagctatagt
ggagagcatgcttacctgatgaatgtaaatcatgctggagtgaatgagatgcaatatact
tcaggtgacgtatcaaagatgatgacttactctccgatagttaatgggatagagttgcag
tcttgtgtgtctaatgtcttcccaaatgggtttcctattaaaaagaacattgctgcaaag
cttgacaagtgcaggaaactgataaaatatgctaagaaatcattggacaatgggacaccc
tattatggaattgaggcatgtaatgaggttttgaatggctatagccatatcattgggtct
gcgcttaaacatgaatgcttgtgcactcgtgctgcactattgatcaagagggactggaaa
aacgatgctcatatggctataagagactgctatgctgctagaaaaatcgataattcctcc
tataaagcactgttctacatgtcagaagcactgtcacagttgggtagacatgaagatgct
ttggattttgctgaagcttcccagtcactggccccacacaaatctgaagttgcagagaga
gtggagaatgtgaagaaggatattgctttagctgaagctgaaaaaaataacaaggccaat
gatggtgcatcaaggtctgacattcgaggtggaagaatattatcgttaagtgacatactc
tatcgcccggaggctaacggtgatgttccacaagatggtcctagatcagacagggatgat
tctgattacgatgaggaattggagttggactttgaaacatcaatgtctggtgacgaggca
caagaccttgattcaaatattcttcatggaagtttaaatgttagaattcaccggagaggt
gactctagagacaatgcaggtgctagtgccccaagcgattcaccttcatcttcgtcacaa
agcagtagagcatgttatttgcctgaaccagctgttgatatgaaacagagatttattggc
cattgcaatattgggacggacataaaacaggccaattttcttggtcaaagaggagaatat
gttgccagtggaagtgatgatggcagatggtttatttgggaaaagcgtactggtagactc
ataaaaattctaaatggtgatggatctgttgtaaattgtatacaatgccatccatttgat
tttgttgtcgcaaccagtgggattgatagcacaataaagatatggactccaagtgcccct
gttccatcttctgtagctggtggttcggctggaccagaaactggcgatgtgttgtctgct
atggaaagcaatcaacaaaagttatcccgtagccgtaattctatattaccctttgagctt
ttggaaccatttagaatgcacgactttcctgagggttcgttacgcttgcgtccatttgaa
tgtgctcaaagctaa
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