Vigna unguiculata (cowpea): 114163218
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Entry
114163218 CDS
T06017
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
114163218
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
114163218
NCBI-ProteinID:
XP_027903195
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Position
9:34883851..34889614
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AA seq
681 aa
AA seq
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MRGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFIWAPEEEGQYYPGRVSRWWLKQSL
VHLDSSLRNLGTRLITKRSTDTVSSLLDLVKSTGATQLFFNHLYDPLSLVRDHRAKEVLN
SQGITVRSFNADLLYEPWDVNDVHARPFTTFAAFWDRCLTMPYDPDSPLLPPKRIIPGDV
SRCPSDTLVFEDESEKASNALLARAWSPGWSNANKALTAFINGPLIEYSINRRKADSATT
SLLSPHLHFGELSVKKVFHLVRIKQLLWANEGNKASEESVNLFLKSIGLREYSRYISFNH
PYSHERPLLGHLKFFPWVVNEAYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGRQFDRIDHPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPEFVLQASGIELGTNYPLPIVGIDAAKTRLQEA
LSEMWQLEAASRAAMENGTEEGLGDSSESIPAAFPQDMQMEETHEPVRNNPFPVGRRYLD
QMVPSITSTLLRIEEEETTSDLRNSAEESSRAEVPINVDAQQNAGVISNERMLQNAHRNT
QVQNNTTMELRNVAEDSGVESSSGTRRERDGGIVPVWSPPASSYSEQFVGDENGITSGSS
YLQRHPRSHQLLNCRQLPQTG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtggtggatgcagcatagtttggttcagaagagatctgagggtggaagacaac
cctgcactggcggccggagtaagagccggagctgtggttgcagttttcatctgggcaccg
gaagaagaaggccaatactaccccggcagagtctccaggtggtggctcaaacaaagcttg
gttcatcttgattcttctctcaggaatcttggcactcgtctcatcactaagcgatccact
gatactgtttcttctctccttgaccttgttaaatccactggagctactcaactctttttt
aatcatttatacgatcccctgtcgcttgtaagggatcaccgagccaaagaggttctgaat
tctcagggcataacagtacgttccttcaacgcggatttactgtatgaaccgtgggatgtg
aatgatgtccatgctcgacccttcacaacttttgctgctttttgggacagatgtcttacc
atgccttatgacccagactcacctcttcttcctcctaaaaggataattccaggtgatgtg
tcgagatgcccaagtgacacattggtgtttgaagatgaatcagagaaggcaagcaatgca
cttcttgcgagagcatggtcaccggggtggagcaatgctaacaaggcattgacagcattc
ataaatggtccactgatagagtactcaataaatcgcagaaaggctgacagtgccacaacc
tcacttctctcaccccatttgcattttggtgagctgagtgtgaagaaggtcttccatctt
gtccgcatcaaacaacttctgtgggccaacgaaggaaacaaggccagtgaagagagtgtg
aacttgttccttaaatctattggtctcagagaatattcgaggtacattagtttcaaccac
ccctacagtcatgaaaggcctcttctgggccaccttaagttctttccttgggttgtaaat
gaggcttattttaaggcatggagacaaggcagaactggttaccctttggtcgatgcaggg
atgagggagttgtgggccactggttggctgcatgatcggatacgtgttgtagtttccagt
ttctttgtcaaggttctgcagcttccttggagatggggaatgaaatatttctgggacacc
ctcttggatgcagatcttgaaagtgatgctcttggttggcaatacatatctggcacactc
cctgatggtcgtcaatttgaccgaatagatcatccacagtttgagggctataaattcgac
ccaaatggagaatatgtacgacggtggcttccagaacttgcaaggttacctactgagtgg
attcatcatccttggaatgcaccagaattcgtgctccaagcttctggaattgagctagga
accaactatcctcttccgattgtgggaatagatgcagcaaaaactcgattacaagaggca
ctatcggaaatgtggcaactagaggctgcttcaagagctgcaatggaaaacggaactgag
gaaggacttggagactcctctgaatcaatccctgctgcttttccacaagacatgcaaatg
gaggaaactcatgaacctgttaggaacaatccctttcctgttggtcggcgttacctggat
cagatggttccaagcatcacttccacccttctcagaatagaagaggaagaaacaacttct
gatctccgaaactcagcagaagagagcagcagagctgaagtgcctataaatgtagatgca
caacagaatgcaggagttatatcgaacgaacggatgttgcagaatgctcacaggaataca
caagtacaaaacaatactacaatggaactgagaaacgtggccgaagattctggcgtagaa
tcttcaagtggtacaaggagagaacgcgatggaggtatagttccagtatggtctccccca
gcttccagttactcagaacaatttgtaggagatgaaaatggtattacaagtggttcctcg
tacttgcaaaggcatcctcggtctcaccaattactgaattgtaggcagctacctcagacc
gggtaa
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