Vigna unguiculata (cowpea): 114164083
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Entry
114164083 CDS
T06017
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114164083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114164083
03036 Chromosome and associated proteins [BR:
vun03036
]
114164083
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114164083
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114164083
PBAF complex
114164083
GBAF(ncBAF) complex
114164083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
C1_2
Myb_DNA-bind_6
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
114164083
NCBI-ProteinID:
XP_027904391
LinkDB
All DBs
Position
9:32398430..32403481
Genome browser
AA seq
537 aa
AA seq
DB search
MEVTKDPNSNPGRLDDSDPELELYTIPSSSRWFAWDEIHETERTAFKEFFDASSISRTPK
IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTFLHKAFLFLQNWGLINYGAPSAADA
EKEEEEEEPCKVRLEEGTPNGIRVAATPNSLKPMLVPRGAKTGGNATAASLKLPPLASYS
DIYGDLIRQKEGNCGLCGGKYSSGHYRCTQDNFIICANCFKSGNYGEKRSAEDFVLSESS
ENSGKHDTVWTEGEILLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGP
AHRNVNVNSANGIVVNNTKQVQSSSSDYQEISKTKDQPPELTNENEQNGDATKESPSKRQ
RVTPLSDSSGSLMNQVGLISNVVDPHITAAAADAAVSALCDENLCPREIFDVEEDSARDL
EGEGLEVERSSISEIPLPLRVRAATATALGAAAARAKLLADQEVREIEQLVATIIEAQID
KLLHKVKHFDDLELLMEKEHAEVENLKESILTERIDVLRRTFRSGITRWKDYSYVKS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcacaaaagatcctaactcaaacccgggtcgcttggacgattcagatcccgaa
ctcgaactctacaccatcccaagctcttcaagatggttcgcgtgggacgaaattcacgaa
accgagagaacagcattcaaggaattcttcgatgcgagttcgatttcgagaacacccaag
atatacaaagaatacagagactttatcatcaacaagtacagggaagagccttccaggagg
ctcacattcaccgaggtgagaaaatcgctggttggtgacgtcacgtttctgcacaaggcg
ttcttattcctacagaattggggtttgatcaactacggcgcgccctctgctgcagacgcg
gagaaggaggaggaggaggaggagccatgcaaggttcgcctcgaagaaggaacccccaat
gggattcgggtggcggccacgccgaactcgttgaagccgatgttggtgcctcgcggtgcg
aagactggtggaaatgcgaccgcggcttccctcaaattgccgccgctggcctcctattcg
gatatttatggggatttgattagacagaaagaggggaactgtgggctttgtggtggaaaa
tatagttcaggacattaccgatgtacccaggataatttcattatttgtgcaaattgtttc
aaaagtgggaattatggggagaaaaggtctgcagaggatttcgtattgagtgagtcaagt
gaaaatagtggcaagcatgacactgtctggactgagggagaaattcttctccttttggaa
tctgttttgaagcatggggatgactgggaacttgttgctcaaagtgttcaaaccaagact
aaacttgactgtatctcaaaactcattgagctgccttttggagagctcatgttgggccct
gcccacagaaatgtcaacgttaatagtgctaatggtatcgtggtgaacaatacaaaacaa
gttcagtcatcttcatctgactaccaagaaatttcaaaaacaaaggatcaacctcctgag
cttacaaatgaaaatgagcagaacggagatgctacgaaggaaagtccttcaaaaagacag
cgtgttactcccctgtcagattccagtggttcgctaatgaatcaggtgggactgatctct
aatgtggttgaccctcatatcacagctgctgcagctgatgctgctgtttcagctctttgt
gatgagaatttgtgtccaagggagatatttgatgttgaagaagattcagcaagagatctt
gagggagaaggtttagaggtagagaggtcctctatatcagaaataccgttgccactgcgt
gtaagagccgccactgcaactgctcttggagctgctgctgctcgagcaaaattgttggca
gatcaggaagtcagagagattgaacaattagtggcaactataattgaagctcagatcgat
aagttgctgcacaaggttaaacattttgacgatctggagctgttgatggaaaaggaacat
gctgaagtggaaaatctaaaagagtctatcttgactgaacggattgatgtgttaaggaga
acatttagatctggaatcactagatggaaagattattcctatgtaaaatcttag
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