Vigna unguiculata (cowpea): 114164169
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Entry
114164169 CDS
T06017
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114164169
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
vun00535
]
114164169
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114164169
Meiosis-specific proteins
Cohesin complex and associated proteins
114164169
Proteoglycans [BR:
vun00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
114164169
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
ATG14
DUF8567
TMF_DNA_bd
DUF6507
Motif
Other DBs
NCBI-GeneID:
114164169
NCBI-ProteinID:
XP_027904525
LinkDB
All DBs
Position
9:complement(6959078..6988809)
Genome browser
AA seq
1203 aa
AA seq
DB search
MYIKQVVIEGFKSYREQISTEPFSSKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRGED
RQALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYAIFSKEVQDAQQKLT
EIEDVRAKVSETSAKKYNDVLDAHEKSKDLENTLKDVSKELQNFNKEKEAIEKRRTVALK
KHTELELDVKDLQEKISGNIRAKEDAARQLEILEKEIQDSTIELEKIIPLHEDQIQKEKD
IAMQIMEREKKLSILYQKQGRATQFSSKAARDKWLQKEIDDLERVHSSNKGQEQKLLDEI
DRLKEELHDCDETINKRKSDITALESVIAESFKGLNHFKLERDKLNLERKSLWTKENEIT
AEIDKLRAEVEKAEKNLDHAIPGDVRRGLNSVRKICREYNISGVHGPIIELLNCDEKFFT
AVEVTAGNSLFHVVVENDDKSTQIIRHLNSQKGGRVTFIPLNRVKAPRITYPQSSDVIPL
LKKLNFKHDYTPAFSQVFARTVICKNLDVASRVARTDALDCITLDGDQVSKKGSMTGGFY
DHRRSRLRFMNIIKQNADTIRIREEELEKVRFNLQEIDQKINELVAEQQKIDAKRAHDKS
EIEQLKQDIANANKQKQLISKALAKKEKSVGDVQNQIEQLKASIAMKNAEMGTELIDHLT
PEEKKLLSDLNPEIKDLKEKLVACKTDRIETEARKAELETNLTTNLRRRKQELEAVISSV
DSDSLVGEAESKGQELSDAKMLVDDLTEQLRRVAESINDRTRQIKKIKDELNKLKSLEDE
YERKLQEEAKELEQLLSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLHKMLH
RCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDHDDDEDEDGPREVNPEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMIRRLADVANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVSKEDALEFIEHDQTH
NAE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggttgtgatcgaaggttttaagagttatcgagagcaaatttccaca
gagcctttcagctctaaagtgaactgtgttgttggtgctaatggatctgggaagactaac
ttttttcatgccatccgttttgtattaagtgatctttttcaaaacctacgtggtgaagat
cgacaggcactactccatgaaggagctggacaccaagttttatctgcttttgtggagatt
gtctttgataattcagacaaccgcatcccggttgacaaggaggaagtgcgattgcggcgg
actattggtttgaaaaaggatgagtattttcttgatggaaaacacataacgaaaactgaa
gtgatgaacttgctggagagtgctgggttctcccgttcaaatccttattatgttgtacaa
caaggaaagatagcatcattaaccttgatgaaagactctgaaagactggacttgctgaag
gaaattggtggtactagagtttatgaggagaggcgccgtgaaagtttgaaaataatgcag
gaaactggtaacaaaagaaagcaaataatccaagttgtacagtatttagatgaaaggctg
aaggaactagatgaggaaaaggaggaacttagaaaatatcaacagcttgacaaacaaaga
aaatcattagaatatgctatttttagcaaagaagttcaagatgctcagcagaaacttaca
gagatagaagatgttcgggccaaggtttctgaaacatcagcaaaaaagtataatgatgtt
cttgatgcccatgagaaatccaaagatttagagaatacattaaaagatgtatcaaaagaa
cttcaaaactttaacaaagaaaaagaagctattgaaaagcgacgaacagtggcgctaaag
aagcacacagagcttgagcttgatgtcaaagacttgcaagagaagatctctggaaacatc
cgagcgaaggaagatgctgcaagacaactggagatacttgagaaagaaattcaagattca
accattgaactggaaaaaatcattcccttacacgaggatcaaattcagaaagaaaaagac
atcgccatgcaaataatggagcgtgaaaagaaactcagtatactctatcaaaagcaaggt
cgagctacccagttttcaagtaaagcggctcgtgataagtggcttcaaaaggagattgat
gatcttgaacgggtgcattcttcaaataaggggcaggagcaaaagcttttggatgaaatt
gatcggcttaaagaagaactgcatgattgtgatgaaaccataaataaacgtaaatcagat
attactgctttggaatctgtcattgctgagtcatttaaagggcttaatcatttcaaattg
gagagagacaagttaaatctcgagaggaagtccctatggacaaaagagaatgaaattact
gctgaaattgataagctgagagcagaagttgagaaggctgaaaagaatcttgatcatgca
attcctggtgatgtgagaagagggctgaattcagttagaaagatttgcagggagtataat
atttctggagttcatggtccaattattgagttgctgaattgtgatgaaaagttcttcact
gccgttgaagttacagcaggaaacagcttatttcatgttgttgttgaaaatgatgacaag
tcaacccagataattagacatcttaattcacagaaaggtggtagagttacatttattccg
cttaacagagtaaaggctccacgcatcacttatcctcagagttcagatgtcatacctctt
ttgaagaaattgaattttaaacatgactatactcctgcattcagtcaggtttttgctaga
acggtcatctgcaaaaatttggatgtggcttcaagggttgctcgtactgatgctctggac
tgcataacactggatggtgatcaagtaagcaagaaaggtagtatgacaggaggattttat
gatcaccgaagatcgagattaaggtttatgaatatcattaagcagaatgcagacactatt
cgcattagagaggaggaattggagaaagttagatttaatctacaggagatagaccaaaag
attaatgaacttgttgctgagcagcagaagattgatgccaagcgtgctcatgacaaatct
gagatagaacagcttaagcaagatatcgctaatgctaataagcagaagcagttgatttct
aaagcacttgcaaaaaaggaaaagtctgttggggatgtccagaaccagattgaacagctt
aaggctagtattgcaatgaaaaatgccgagatgggcactgagctaattgatcatttaaca
ccggaggaaaagaaactcctgtcagatttgaaccctgaaatcaaagaccttaaagagaag
cttgttgcttgcaagactgatcgaattgagactgaagcaaggaaagcagaactggagacc
aatcttactactaaccttaggagaaggaaacaagagctggaggctgtaatatcatcggtg
gattctgactctctggttggtgaggctgaatccaaggggcaggaacttagtgatgctaaa
atgttggttgatgacttaacagagcagcttagaagagttgctgaaagtataaatgatcga
acaaggcaaattaaaaagatcaaagatgaattgaataaattgaagtctttggaggacgaa
tatgaaagaaaacttcaggaagaagcaaaagaattagagcaattgctgagtaaaaaaaat
acatatgcagctaaagaagaagagtatgccaagaaaataagggaactgggaccattgaca
tcagatgcttttgaggcgtatagacgaaggaatataaaagatttgcacaaaatgctgcac
aggtgcaatgagcaattgcagcagttcagtcatgtaaacaagaaagcactggaccagtat
ataaattttacagaacaacgagaagaacttcagaaaagacaggccgaacttgatgcagga
gatgagaaaattagggagctgatatcagtgcttgatcagcggaaggacgaatccatagaa
cgcactttcaaaggtgttgctaggcattttcgggaagtattttctgaacttgtgcagggt
ggccatggtcatctggttatgatgaaaaagaaggatggtgatcatgatgatgacgaagat
gaggatggtcctcgtgaagtaaatccagaggggagagttgaaaaatacattggagtgaaa
gtgaaggtctcatttactggacaaggggaaacacagtccatgaaacagttgtctgggggt
caaaaaactgtggttgcccttacgcttatctttgccatacagcgatgtgatcctgctccc
ttttatctatttgatgaaattgatgcagctctggatccacagtacagaacggctgttgga
aatatgattcgtcgcttggctgacgtagcaaacactcaatttatcacaacaacatttcgc
ccagagctagtgaaagttgctgacaaaatatatggtgtaacacataaaaacagggtcagt
cgtgttaatgttgtatccaaggaagatgcattggaattcattgagcatgaccagacgcac
aatgctgaataa
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integrated database retrieval system
