Vigna unguiculata (cowpea): 114164213
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Entry
114164213 CDS
T06017
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03082
ATP-dependent chromatin remodeling
vun03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114164213
03083 Polycomb repressive complex
114164213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114164213
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
114164213
Histone modification proteins
HAT complexes
HATB complex
114164213
HDAC complexes
Sin3A-HDAC complex
114164213
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
114164213
PRC2.2
114164213
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
114164213
Heterochromatin formation proteins
Other heterochromatin formation proteins
114164213
Chromatin remodeling factors
NuRD complex
114164213
NuRF complex
114164213
NuRF complex (fruit fly)
114164213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
eIF2A
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IP5PC_F
Med3
Motif
Other DBs
NCBI-GeneID:
114164213
NCBI-ProteinID:
XP_027904592
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All DBs
Position
9:complement(2860177..2866721)
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AA seq
501 aa
AA seq
DB search
METPPQQGVVKKKETRGRKPKPKDDKKDEHSKTKEGRKTQQYQQQQQQQQPSVDEKYTQW
KSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCE
VVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLV
WDVENQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKTVVLWSIED
HITSAATGGSIIKPNSKSGETNDKTAESPSVGPRGIYCGHEDTVEDVTFCPSSAQEFCSV
GDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLT
TNGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERSGKSIS
APPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEE
VLAELEKFKSHVVACASKSEK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggagactcctcctcagcaaggtgtggtgaagaagaaggagacaaggggtcgaaaacct
aagccaaaggacgacaagaaagatgaacactccaagacaaaggaagggagaaagacacaa
caatatcagcaacaacagcagcagcaacaaccttcggtggatgagaaatacacgcaatgg
aagtcccttgtccctgtcctctatgactggcttgctaaccataatctcgtttggccctct
ctctcttgccggtggggtcctcagctcgaacaagccacttataagaatcgtcagcggctc
tatctttcggagcagactgatggcagtgtgccaaatactctggtaatagcgaattgcgag
gttgtgaagcctagggttgcggctgcagagcacatttcacagtttaatgaagaggcacgg
tccccctttgtgaagaagttcaagaccatcatacatcctggcgaggtgaacagaattagg
gaattaccacaaaattccaagatagtggcaacacatacagatagccctgatgtccttgtt
tgggatgttgagaatcaacctaaccgtcatgctgtccttggagctacaaactctcggcct
gatttgatattgactggacaccaagacaatgcagaatttgctcttgctatgtgcccaact
gagccctatgttctttcaggaggaaaggacaaaacggtggtattgtggagtattgaggac
catataacatctgctgccacaggtggatcaattatcaagccaaactctaaatctggggaa
accaatgataaaactgctgaaagcccttctgtcgggccacgaggtatctactgtggccat
gaggatactgttgaagatgtgactttctgtccatctagtgcacaggagttctgtagtgtt
ggagatgattcttgtctcatcttatgggatgcacgtgttgggtctagccctgtggttaag
gttgaaaaagctcataatgctgatcttcactgtgttgattggaatccacatgatgataat
ctgattcttactgggtcagcagataattctgttcgcatgtttgatcgtcgcaatctcacc
actaacggagttgggtcgcccatccataaatttgagggtcacaaagctgctgttctttgt
gttcagtggtctccagacaaatcatctgtatttggtagttcagctgaggatggtctcttg
aacatttgggactatgagaaggttggtaaaaagatagagcgatctggaaaatcaataagt
gctcctccagggttgtttttccaacatgctggtcatagagataaagtagtcgattttcat
tggaatgcatatgatccttggacaattgttagcgtctctgatgactgtgaaagtactggt
ggagggggcacattgcagatatggcgcatgagtgatttgatctacagaccagaagaagag
gttttagcagagctggagaaattcaaatctcatgtggtggcatgcgcttccaagtctgaa
aaatga
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