Vigna unguiculata (cowpea): 114164322
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Entry
114164322 CDS
T06017
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vun03041
]
114164322
03009 Ribosome biogenesis [BR:
vun03009
]
114164322
Enzymes [BR:
vun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114164322
Spliceosome [BR:
vun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114164322
Ribosome biogenesis [BR:
vun03009
]
Eukaryotic type
90S particles
Helicases
114164322
Pre-60S particles
114164322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Cas3-like_C_2
POP1_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
114164322
NCBI-ProteinID:
XP_027904757
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All DBs
Position
9:6405021..6411237
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AA seq
542 aa
AA seq
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MAEAEDYDTSSPERENQTKVNKKKLRKRKRPNKSENTQEEKNDAKIDSMVSQGEDAEEEE
KEEIKVNTNDSFGIMSSESFSSLSLSEATSKAIGDMGFDCMTQIQARAIPPLLIGKDVLG
AARTGAGKTLAFLVPAVELLYNAQFTPLKGTGAVVICPTRELAIQTHAVAKELLKYHSQT
LGLVIGGAGRKGEAERIVKGVNLLVATPGRLLDHLQNTKGFVYKNLKCLMIDEADRILEA
NFEEEMKQIINILPKKRQTALFSATQTKKVADLARLSFQTTPIFIDVDDGRKKVTNEGLQ
QGYVVVPCAKRFVVLYSFLRRYQSKKVMVFFSSCNSVKFHADLLKCAGVDCLNIHGKQKQ
HARTSTFFNFCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARGEG
AKGNALLFLIPEELKFLHYLKAAKVPVKEYEFDHKKLANVQSHLEKLVAGIYHLNNMAKD
AYRSYILAYNAHSMKDIFNVHHLDLLAVATSFCFSNPPKVNLDIDSSASKHRKKVRKVEG
KR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcagaagactacgataccagctcgcccgagcgcgagaaccaaaccaaagtt
aacaagaagaagcttcgcaagagaaaaagaccaaacaaaagcgagaatacacaagaggag
aagaacgatgcgaagattgatagcatggtgtcacaaggtgaagatgcagaagaagaagaa
aaagaagagataaaggtgaacactaacgattcatttggaatcatgagttccgagtctttc
tcctctcttagcttgtccgaagctacttccaaagccattggggacatgggcttcgactgt
atgactcagattcaagcgcgggcgattccgccgttgctgatcggaaaggacgtgctgggt
gcggcgagaacgggtgctgggaaaaccctagcgtttttggttccggcggtggagttgctg
tacaacgctcagttcacaccgctcaagggaacgggtgctgttgtgatatgcccgacgagg
gagctcgcgattcagacgcacgccgtggcgaaggaactgctgaagtaccactcacaaacg
ctcgggttggtgattgggggtgcggggcgtaagggagaggctgagcgcattgtgaaaggg
gtaaacctcttggtggcgacgccgggtaggcttctcgatcatcttcaaaacacgaagggg
ttcgtatataaaaacttgaagtgcctcatgattgacgaagctgacaggatattggaagca
aactttgaggaggagatgaagcagattattaacatacttccaaagaaaaggcaaacagct
ttgttttcagccacacagacaaagaaggttgcagatcttgcccgcttatcttttcagaca
actcctatctttattgatgtagatgatgggagaaaaaaggtcacaaatgaaggattgcaa
cagggttatgttgttgttccctgtgctaagcgttttgttgttctctactcattcttgagg
agatatcaatcaaaaaaagtgatggtttttttctcttcatgcaattctgtcaaattccat
gcggatcttctcaagtgcgctggggtggactgcttaaatattcatggaaaacaaaaacaa
catgcccgtacttctacgttcttcaacttctgcaaagctgaaaaggggatcttgctctgt
actgatgttgctgctcgtggacttgacatacctgatgtggactggattgtgcagtatgat
ccacctgatgaaccaaaggaatatatccatagggttggtagaacagctcgtggggaaggt
gcaaagggaaatgctttactttttctgattcctgaagaattgaaatttcttcactatttg
aaggcagcgaaggttcctgtgaaagagtatgaatttgatcataagaagctggcaaatgta
caatctcatctggagaagttggtagctggcatttatcatttgaacaatatggctaaagac
gcatatcgatcatatatattagcgtataatgcacattctatgaaagatatattcaatgtt
caccacttagatttactggctgttgctacttcgttttgtttttccaacccaccgaaggtg
aatctcgacatagatagcagtgcttcaaagcataggaagaaagtacgcaaagtggaagga
aagagatga
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