Vigna unguiculata (cowpea): 114165080
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Entry
114165080 CDS
T06017
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114165080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114165080
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114165080
mRNA degradation factors
5'-3' decay
Lsm complex
114165080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
114165080
NCBI-ProteinID:
XP_027905534
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All DBs
Position
10:complement(38127863..38130973)
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AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPERMTRVSTAEIKRAQKAEREASDLKGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggccctgaggatatttacctttccacttcacttgccagctatcttgac
aagaaacttcttgtattgctgagagatggtagaaagctcatgggaacgcttcgctctttt
gatcaatttgcgaatgcagttcttgagggtgcctgtgagagggttattgttggtgatctg
tattgtgacatccctttgggtctctatgtgatccgtggggaaaatgttgttctaatcggt
gagctggacttggagagggaggaacttcctgaacgcatgactcgtgtttctacagcagaa
atcaagagggcacagaaagcagaaagggaggcctcagatctgaaagggactatgaggaaa
agaatggaattccttgactttgactag
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