Vigna unguiculata (cowpea): 114165708
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Entry
114165708 CDS
T06017
Name
(RefSeq) protein LHY-like
KO
K12133
MYB-related transcription factor LHY
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
114165708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vun03000
]
114165708
Transcription factors [BR:
vun03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
114165708
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
114165708
NCBI-ProteinID:
XP_027906072
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Position
10:37348399..37357871
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AA seq
748 aa
AA seq
DB search
MEAYSSGEEVIVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTRIGTATLHSGAK
DGKLNLVESSHDNQALDLEKEPLPEKYDLDEGPTTVKENKDDNCSKVFTVIQEVPCSSLS
SANRSSISVSVPLGNSCVFKEITTSVKEVITRDEKTKSFLTVELENGNLEINDGEQANGT
SKNSTLENSDALQMKLDQNEKTDGLDSALTIDGMQGNQNYPRHVTVHVVDGNLGTSTQKP
SQDMLFRDCMFQPIGGANGQPNLFTKSAPSNTSESQNNTARSSVHQSFLPYPPFTQHNQD
DYQSFLHMSSTFSNLIVSTLLQNPAAHAAASFAATFWPYANPETSADSPRCSQGGFTSRQ
IGSPPSVATIAAATVAAATAWWAAHGLLPLCAPLHTAFGCPPASVTAVPSMNTAETSSLK
AEQEKSTLQNPPLQDQMMHPEYSEAPQAQHSASKSLAVISSDSENGDAKLNTSPKATVHE
TNETISEHLDSNKTKGRKQVDRSSCGSNTASSSDVETDALGKDEKGKEEPETPDANHLAI
EFSNRRRSICNLTDSWKEVSEEGKLAFQALFSREVLPQSFSPPHALKNKDQMGITNDNQQ
TIDDRNEDLDGKKGSSNYKPMQKNPPFVENNVGLLTLGLGQGKLKTRRTGFKPYKRCSME
AKENRVGASNQGEEKGCKRIRLEGDTTT
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtactcctctggagaagaagtaattgtaaagacgaggaaaccgtatacaatc
acaaagcaaagggaacgatggacagaggaggagcataataggtttttagaagctttgaaa
ctgcacgggcgagcatggcagcgcatagaagagcatataggaacaaagactgccgtgcaa
atcaggagccacgcacaaaagtttttcacaaagttggagaaagaagcccttgtaaagggt
gttccaattgggcaagctcttgatatagatattccccctccacggcccaaaagaaaacca
agcaatccttatcctcggaagactaggattggtaccgcaacattacatagtggagcaaag
gatggaaagctcaatttagttgaatcttcacatgacaaccaagcactggacttggaaaaa
gaaccacttccggagaaatatgatttagacgaggggccaacaacagtaaaggaaaataag
gatgacaactgctcaaaagtatttacagttattcaggaggtaccatgttcttctctatct
tcagcaaacaggagttcaatatctgtgtcagtgccgttgggaaattcatgcgtattcaag
gagattacaacttcagtgaaagaggtaataactcgagatgaaaaaactaaatcatttctg
actgttgaacttgaaaatgggaatttggagatcaatgatggagaacaggctaatggcact
agtaaaaactccacgttagagaattctgatgctttacaaatgaaattggatcaaaatgag
aaaacagatggtctcgatagtgcattaacaatagatgggatgcaaggcaatcagaattac
cctagacatgtaactgtgcacgttgttgacgggaaccttggaacaagtactcaaaagcca
tcacaagatatgctgtttcgagactgcatgtttcagccaataggaggggctaatgggcaa
ccaaatcttttcaccaagtcagctccatcgaacacaagtgaaagtcaaaataacacagca
cgatcttctgttcatcaatcatttcttccgtatcctcccttcacacaacacaaccaggac
gattaccaatcatttcttcacatgtcttccacattttctaatcttattgtctctaccttg
ctgcaaaacccagcagcccatgctgcagcaagtttcgctgctacattttggccctatgca
aatccagagacttcagcagattctcctaggtgctctcaaggaggtttcacatctagacaa
attggttcccctccaagcgttgcaactattgcagctgctactgtagctgctgcaactgcg
tggtgggcagctcatggactgcttcctttgtgtgctcctcttcatactgcttttggctgt
cctcctgcatctgtgactgcagtcccatcaatgaatactgctgaaacatcatctctaaag
gcggaacaagaaaaaagtactctacaaaatcctcctctgcaagatcagatgatgcatcca
gagtactcggaagctcctcaagctcaacattcagcttcaaaatcactggctgtcatttca
tcagattctgagaatggagatgccaagttaaatacttcaccaaaggctaccgttcatgag
acgaacgaaacaatttctgagcaccttgattccaacaaaacgaagggccgaaaacaggtt
gaccgttcctcgtgtggttccaacacagcctcaagcagcgatgtggaaactgatgcacta
gggaaggatgagaaagggaaggaagagcctgaaacacccgatgctaaccatttagccatt
gagtttagtaatcgtcgtagaagcatttgcaaccttaccgattcttggaaagaggtctct
gaagaggggaaactagcctttcaggctctattctccagagaggtgttgcctcaaagcttt
tcacctcctcatgctttgaagaataaggaccaaatgggcatcaccaatgataaccagcaa
accatagatgacagaaatgaagaccttgacggcaagaaaggcagttctaactataaacca
atgcagaaaaacccgccatttgtagaaaataacgtgggactgttaaccttagggctcgga
caaggaaagcttaagactcgtcgaacaggctttaaaccctacaaaagatgttccatggag
gccaaggaaaatagggttggagcgagcaatcaaggtgaagagaaaggttgtaagagaata
cgtttggaaggggatactacgacttga
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