Entry |
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Name |
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
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KO |
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Organism |
vun Vigna unguiculata (cowpea)
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Brite |
KEGG Orthology (KO) [BR:vun00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:vun03009]
114165886
Enzymes [BR:vun01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114165886
Ribosome biogenesis [BR:vun03009]
Eukaryotic type
90S particles
Helicases
114165886
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
10:complement(31280776..31288159)
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AA seq |
1313 aa
METWESSGDVIEMNSQSLGDGDSNALILPAKRMKKRKGKEQDHRKAQSNKKQKLSKPQKR
KKKFEDDKEKQRLQEQAIKTMNEHTLPEYAYHLLQSSCNINRNETMKEKRRRAVHLLKEG
LNVSYNGLSKEPEMDEIHSAQDDEVEKNDIQIQPIKSEEVLNTTLTPLESSEELLHGNEV
ENYKYVSGNLADISIDKQLYEIRSSPLSCSVDEIKDRTDENNKPNGLSNLDYSAPRASNV
PTVVHVYRPSEVEDKRKDLPIVMMEQEIMEAINDCSSVIICGETGCGKTTQVPQFLYEAG
YGSSKGVIGVTQPRRVAVLATAKRVAYELGLHLGKEVGFQVRYDKKIGENCSIKFMTDGI
LLREVQNDILLRRYSVIILDEAHERSLNTDILIGMLSRVIKTRQMIYNEQQKMILSGEII
SPEKIIFPLRLVLMSATLRVQDFTSGKLFQTAPPVIEVPTRQFPVTVYFSKKTEKTDYIG
EAYKKVLAIHKRLPPGGILVFVTGQREVEDLCRKLRKASKEFIKKKVEGSVQTDSTVINE
KKSDEGVNIREINEAFEVHGTSSFQQTDRFSSYDEDEDNANENESDFSYDTETESELEFD
DDNLVLPENNSNIVNALGQAGSLASLKAAFEKLSGQATSSSSNEEKTFSANIEGNLDQSK
ALSEKRTKENCSTPGALCVLPLYAMLPAAAQLRVFEKVGEGERLVVVATNVAETSLTIPG
IKYVVDTGREKVKNYDPSNGMETYEIQWISKASAAQRAGRSGRTGPGHCYRLYSSAAFNN
EFPEHSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKAASLLEAENCLKSLEALDSK
DELTTLGKAMAHYPLSPRHSRMLLTVVKNTRQELKCNLNLLLAYAVAAAAALSLSNPFIM
QYEDDNSRDSKMSEKSGMGDGERDFDKKGKSRRKKLKETAKVAREKFRVVTSDALTIAYA
LQCFEHSQKSVEFCDDYALHFKTMDEMSKLRQQLLKLVFYQVDKGGLEEEYSWIHGTLED
VECAWQVSSEKYPLSLVEERLICEAICAGWADRVAKRITSFSRVFDGEKTSRALRYQSCM
VDESVLLHRWSSLSTVGPEYLVYNELLETKRPNKEGISTMRAYMHGATSVEPAWLVEHAK
SSCVFSAPLKDPRSYYDAQTDQVKCWVTPAFGRFSWKLPMHSLPISNDEDRVQVFAYALL
EGQVCPCLKSVRKYMSAPPESIMKKEAFGQKRVGNLLSKLKSRLIDSSAVLRMVWKENPR
ELFAEILDWFQHSFHKHFEELWLQMHNELLMGTQKGPQHKSSRKKKVKSKGLS |
NT seq |
3942 nt +upstreamnt +downstreamnt
atggaaacttgggaaagctctggtgatgttattgaaatgaattctcaaagtctgggagat
ggtgatagtaatgcactgattttgcctgcaaagaggatgaagaaaaggaaagggaaggaa
caggatcatcgaaaagctcaatcaaataaaaaacagaaattgagcaaacctcagaagagg
aagaagaagtttgaggatgacaaggagaaacaacgtctgcaggaacaagctattaagaca
atgaacgagcacacacttccagagtatgcgtatcatcttctacagtcttcatgcaatata
aatcggaatgagactatgaaggaaaagcgtaggagggctgttcatttgttgaaagaagga
ttgaacgtttcatataatggactgtctaaggaacctgagatggacgagattcattcagca
caggatgatgaagttgaaaaaaatgacattcaaattcaacccattaaatcagaagaagtc
ttaaatacaactttaacacctctggagtcctctgaagaactacttcatggcaatgaagtt
gaaaattataaatacgtttctggaaatcttgctgacatttccattgacaaacaactttat
gaaatcagaagttctccattgtcttgttcggtcgatgaaataaaggatagaacagatgag
aacaataagcccaatggattgagcaaccttgattattctgcaccaagggcttcaaatgtt
cctactgttgtgcatgtgtatagaccaagtgaagttgaagacaaaagaaaagatttgcct
atagttatgatggagcaagagataatggaagctataaatgactgttcaagtgttatcata
tgtggagaaactgggtgtggtaaaacaactcaagttcctcagtttctttatgaagctggt
tacggttcaagtaagggtgtcattggtgttactcaacctcgtcgagtggctgttcttgct
acagctaagcgtgtggcatatgagcttggtcttcacttagggaaggaggttggttttcaa
gtcagatatgacaagaagattggtgaaaattgttctatcaagtttatgacggatggaatt
ttgctacgagaagttcagaatgatattttgttgagacgttattctgtcataattcttgat
gaggcccatgagaggagcttgaacacggacattttgatcgggatgctctcacgtgtaatt
aaaactcgccaaatgatttataatgaacaacagaagatgatactttcaggggaaattata
agtcctgaaaaaattatttttcccttaagacttgtgcttatgagtgccaccttgcgagta
caagacttcacttctgggaagttattccaaactgctccacctgttatagaagttcctact
aggcaatttccagtaacagtatacttctcaaagaaaacagagaaaacagattacattgga
gaagcatataaaaaggtcttggcaattcacaagaggttgccacctgggggcatacttgtg
tttgttactgggcaaagggaagtagaggacttgtgtaggaaattacggaaagcatcaaag
gagtttatcaagaaaaaagttgaaggatctgtgcaaactgatagcactgtgatcaatgaa
aaaaagtctgatgagggagtaaatattagagagattaatgaagcatttgaggttcatgga
acttcatccttccagcaaactgatagatttagtagttatgatgaagatgaggataatgca
aatgagaatgaatctgatttttcttatgacactgaaacagagagtgaactggaatttgat
gatgataatcttgtgcttccagagaacaatagtaatattgtgaatgccttgggacaggca
ggaagtcttgcttcactaaaggctgcttttgaaaaattgtctgggcaggccacatcaagc
tcctcaaatgaagagaagacattttctgcgaacatagaaggtaatttggaccaatcaaaa
gctctcagcgagaaaagaactaaagaaaattgcagtactccaggtgcgctctgtgttcta
cctttgtatgccatgcttcctgcagcagctcaacttcgtgtatttgaaaaagttggggag
ggagagcggcttgtagttgttgctacaaatgttgctgaaacatctttaactatccccggg
ataaagtatgtggttgatactggaagagaaaaggtgaagaattatgacccctctaatggc
atggagacatacgaaatacaatggataagtaaggcatctgctgcacagcgtgcaggcaga
tctggaagaactggtcctggacactgttaccgtctctattcttctgcagcctttaataat
gaatttcctgagcactctcctgccgaagttgagaaagtacctgttcatggtgttgtcctt
ctcttgaaatccatgcatattaaaaaggttgcaaatttcccatttcctacatctcttaaa
gctgcttctttgcttgaagctgaaaattgcttgaaatctcttgaagcacttgatagcaag
gatgaacttacaaccttgggaaaagccatggcacattatccattgagtcctcgtcattct
agaatgctcctcactgttgttaaaaatacaagacaggagcttaaatgtaatttaaatttg
cttttggcatatgctgttgcagctgctgcggcattgagcttgtcaaatccttttataatg
caatatgaagatgataacagcagagattcaaagatgtctgagaaatctggaatgggagat
ggtgagcgagactttgataaaaagggaaagtcaagaagaaagaaactaaaagaaacggca
aaagttgcacgagaaaaatttcgagttgtcactagtgatgccctcaccatagcttatgct
ttacagtgttttgaacattcacagaaatcagtagaattctgtgatgactatgctttgcat
ttcaaaaccatggatgaaatgtccaaacttcgacaacagctacttaaactggtcttttat
caggttgataaaggtggtcttgaagaagagtactcatggatccatggaactttagaggat
gttgaatgtgcttggcaggtttcttctgaaaaatatccactttctcttgttgaggaaaga
ctcatctgtgaagcaatatgtgctggctgggcggatagggttgctaaacgtattacatct
ttttctagggtcttcgatggggagaaaacatctcgtgccttaaggtatcaatcatgcatg
gttgatgaaagtgttttacttcatcgttggtcatcactttctactgtaggccctgagtat
ttggtttacaatgaactattagagaccaaaagaccaaataaagaagggataagtaccatg
agagcatatatgcatggagcaacaagtgtagagccagcttggcttgttgagcatgctaag
tcctcatgcgtcttctcagctcccctgaaggatcctagatcttactatgatgcccagact
gaccaagtaaaatgttgggtaaccccagcctttggccgtttctcttggaagcttccaatg
cattcattgcccattagcaatgatgaagatcgggtgcaagtgtttgcctatgctttgctt
gaaggccaggtgtgtccctgtttaaaatctgttcgaaaatatatgtcggctccccctgaa
agtatcatgaagaaagaagcatttggtcagaaaagggtgggaaatcttttaagcaagtta
aaaagcaggctgattgatagctctgctgtgctaagaatggtgtggaaggagaatcctagg
gaactatttgcagaaattttggattggtttcagcatagttttcacaagcactttgaagag
ttatggctacaaatgcataacgaattgctcatggggacacaaaaaggccctcagcataaa
agttctaggaaaaagaaagtaaaatctaaagggctatcataa |