Vigna unguiculata (cowpea): 114165928
Help
Entry
114165928 CDS
T06017
Name
(RefSeq) sm-like protein LSM1B isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114165928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114165928
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114165928
mRNA degradation factors
5'-3' decay
Lsm complex
114165928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
114165928
NCBI-ProteinID:
XP_027906354
LinkDB
All DBs
Position
10:complement(38123108..38125849)
Genome browser
AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggccctgaggatatttacctttctacttcacttgcgagctatcttgac
aagaaacttcttgtattactgagagatggtagaaaactcatggggatacttcgctctttt
gatcaatttgctaatgcagttcttgagggtgcctgtgagagggttattgttggtgatctg
tattgtgacatccctttgggtctctatgtaatccgtggagaaaatgttgttctaatcggt
gagctggacttggagagggaggaacttcccgaacacatgactcgtgtttctacagcagaa
atcaagagggcacagaaagcagaaagggaggcctcagatctgaaagggactatgaggaaa
agaatggaatttcttgactttgactag
DBGET
integrated database retrieval system