Entry |
|
Name |
(RefSeq) sm-like protein LSM1B isoform X1
|
KO |
K12620 | U6 snRNA-associated Sm-like protein LSm1 |
|
Organism |
vun Vigna unguiculata (cowpea)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:vun00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114165928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:vun03019]
114165928
Messenger RNA biogenesis [BR:vun03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114165928
mRNA degradation factors
5'-3' decay
Lsm complex
114165928
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
10:complement(38123108..38125849)
|
AA seq |
128 aa
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK
RMEFLDFD |
NT seq |
387 nt +upstreamnt +downstreamnt
atgtcttgggcaggccctgaggatatttacctttctacttcacttgcgagctatcttgac
aagaaacttcttgtattactgagagatggtagaaaactcatggggatacttcgctctttt
gatcaatttgctaatgcagttcttgagggtgcctgtgagagggttattgttggtgatctg
tattgtgacatccctttgggtctctatgtaatccgtggagaaaatgttgttctaatcggt
gagctggacttggagagggaggaacttcccgaacacatgactcgtgtttctacagcagaa
atcaagagggcacagaaagcagaaagggaggcctcagatctgaaagggactatgaggaaa
agaatggaatttcttgactttgactag |