Vigna unguiculata (cowpea): 114166221 Help Entry 114166221         CDS       T06017                                  Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism vun  Vigna unguiculata (cowpea) Pathway vun03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:vun00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     114166221  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vun03021]     114166221    03019 Messenger RNA biogenesis [BR:vun03019]     114166221 Transcription machinery [BR:vun03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      114166221 Messenger RNA biogenesis [BR:vun03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      114166221     U7-dependent histone pre-mRNA processing factors      114166221 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_2 HEAT_EZ CRM1_C Motif Other DBs NCBI-GeneID:  114166221 NCBI-ProteinID:  XP_027906717 LinkDB All DBs Position 10:21897521..21928887 Genome browser AA seq 1378 aa AA seqDB search MVGKTMSMAATSREKLASLLNAAKLASDIPSKLESLRQLRHELPPEDPVLLTEFLPSLFF FHSDPFGPVRKFVTEMLGEIGLKNTEFLSDIVPVLIEVLNDDTPAVVRQALLCGIELFRG TLEKIVVQGLYSSDLDGALESAWEWMLKFKEKVYSIAFQHGSGGAKLLALKFVEAVVRLY TPDPSGSSEPTSHQGKPVEFNISWLRRGHPVLNIGDLKIEASHSVGLLLDQLRFSNVKSL SNSVIIVLIKSLSAIANERPAFYGRILPVLLSLQPSSTVVNGFCVSAAHLALKNAFLTCS KCTHPSAAPWRDRLAGALKEIQSEGKADRVFHLISSSNGSIEREKDDQPVIKEEEPAINS DDSVHSNLARKRSGSQIEGDLAEDVPGKRVRATIDALEEPKKELDERTISNSQDETPSNV PASSKGDMDNGPVRQLVATFGALIAQGEKAVGHLEILISSISADLLAEVVMANMQNLPPK FPNTEGNEQLQDINMIGSDDKAKYPPSFVAAVMSLSSTFPPIASLLDAQQSVSNEIEKSQ GEEEISATAVNSGAVHSGMNLVSENVPSPTDFPTSDASIPGVENGCTTMPPDIHDVGNSE SGIPGLDSFGRSDALSQSFDPSLLASTEVGLEDGSQEQDTSLDLRSPLNLAPSVSTDRSE ELSPKAAVRDVNSMVSSTATSVVLPSRLILPKMIAPVVELEDEQKDHLQKSCFMRIIDAY KQIAAAGGSKVRFSILAYLGVEFPLELDPWQLLQKHILIDYTSHEGHELTLRVLYRLFGE AEEEPDFFSSTTAASVYEKFLLTVAEALKDSFPPSDKSLSKLLGESPYLPKSVLKILENM CSPGNGDRGEKELQSLNADRVTQGLSAVWSLILLRPPIRNTCLQIALQSAVHHMEEVRMK AIRLVANKLYPLSSISQQIEDFAKEMLFSVTSSDVSELTDAEGSIADSQKGPDVEKVSNE QSSLSGSTKDVSDNRQSCTSESVSPDSVSEAQRCMSLYFALCTKKHSLFRQIFVIYRSTS KAVKQAVHRQIPILVRTMGSSLDLLETISDPPNGSENLLMQVLHTLTDGTVPSKDLISTV KRLHDSKLKDAEVLIPVLPFLSNEEVIPIFPHIVNLPLEKFQTALGRVLQGSSQSGPVLS PAEVLIAIHGIDPERDGIPLKKVTDACNACFEQRQTFTQEVIARVLNQLVEQIPPPLLFM RTVLQAIGAFPSLGDFIMGILSRLVTKQIWKYPKLWVGFLKCVQLTKPQSFSVLLQLPPA QLENALNRISALKAPLIAHASQQDIQSKLPRAVLVVLGLASDSQVSSQAQTTQTQTSQTQ TTQTQTSQTQTTQTQTSQTQTTQTQTSQTQTSQTQTGETSNSDKDTVTEKSKESSTAS NT seq 4137 nt NT seq  +upstreamnt  +downstreamnt atggtcggaaaaaccatgtccatggcggcaacttcgcgcgaaaagctcgcaagtctcctg aacgcagccaagttggccagtgacatcccatccaagctcgaatccctgcgccaactgcgc catgaacttccacccgaagaccccgtcctcctcactgagttcctcccctcactcttcttc ttccactcagatccctttggccctgttcgcaaatttgtcaccgagatgcttggtgagatt ggattgaagaataccgagtttttgtctgacattgtgcctgtcctaattgaggtactgaat gacgacacaccggctgtggttcggcaagctcttctgtgtggaattgagttatttcgtggc acacttgagaaaattgtggttcagggtctttactctagtgatttagatggtgcactcgaa tctgcatgggaatggatgcttaaattcaaagaaaaagtatactcaatagcttttcaacat ggaagtggtggtgctaagctcctggcactgaaatttgttgaggcagttgttcgtctttac actcctgatcctagtggttcctcagagcctacttctcatcaaggaaagcctgtagaattt aatatatcatggctgaggcgtggtcatccagtacttaatattggagatttgaaaattgaa gctagccatagtgtgggtctcttgcttgatcaactcagattttcaaatgtgaagtccctt agtaactcagttatcattgtgctgattaaaagtctttcagctattgcaaatgaaaggcct gcattctatggccgcatcttgccagttttgcttagtttgcaaccttccagcactgttgtt aatgggttctgtgtatcagctgcacatcttgctttgaagaatgcctttcttacttgctcg aaatgtacacatccaagtgctgctccgtggagagatcgtttggcaggggccttgaaggaa atacagtcagaaggaaaggcagatcgggtgttccacctaatctcatctagcaatggaagc attgagagagagaaggatgatcaacctgttatcaaggaagaggaacctgcaataaattct gatgattcagtacacagtaatttggcaagaaaacgatctggatcacaaattgaaggtgat ttagctgaagatgttcctggaaaacgtgtcagggcaacaattgatgctttggaagaacct aagaaagagttggatgaacgtaccatttccaactctcaggatgagactccttcaaatgta ccagcatcttcaaaaggagatatggataatgggcccgtacggcagcttgttgccacattt ggtgctttgattgctcaaggtgaaaaagctgttgggcatcttgagattctcatctcaagt atttctgccgacttgctagctgaggtggtgatggcaaatatgcaaaacttacctccaaaa ttccctaatactgaaggaaatgaacagctgcaagacattaatatgattggttctgatgac aaggctaaatatccaccatcatttgtagccgctgttatgtcactttctagtacttttcca ccaatagcttcccttcttgatgcacaacaatcagtttcaaatgagattgagaagtcacaa ggggaggaagaaatttctgcaactgctgtcaatagtggtgctgttcactctggcatgaat cttgtatctgaaaatgtaccatctcctactgattttccaacttctgatgctagtatacct ggagtggagaatggctgtacaactatgcctcctgacatccatgatgttggaaactcagag agcggaattcctggcctggattcttttggtcggagtgatgccttatcacaaagttttgat ccttctttattggcttccactgaagtgggcctagaagatggcagccaagagcaagataca agtttggatctgaggtcacccctgaacttagctccatcagtatcaacagatagatctgag gagctgagcccaaaagcggctgttagagatgtcaatagcatggtgtcgtcaacagctact tcagttgtgttgccttcccgtttaatcttgccaaagatgattgctcctgttgttgaactt gaagatgaacaaaaggatcatttgcaaaaatcatgttttatgcgtattattgatgcatat aagcaaatagctgcagctggaggttccaaagtccgtttttcaatccttgcttatttagga gttgagtttcccttggaattagacccatggcaactattacagaagcatattttgattgat tacactagtcatgagggacatgagttgacattacgtgtcctctacagattatttggtgag gctgaagaggagcctgacttcttttcttccactactgcagcttctgtctatgaaaaattc ctccttactgtggcagaagcacttaaagattcctttccaccttctgataaatcattgagt aaattgcttggtgaatctccttatttaccaaaatcagttcttaaaattttagaaaacatg tgttctcccggaaatggggatagaggtgaaaaggaattacagtcactgaatgcggataga gttactcaaggtctaagtgctgtatggagtttgattcttcttaggcctccgatccgaaat acttgcttacaaattgctttacagagtgcagtgcatcatatggaagaagtgcgtatgaag gcgatacgtctggtagcaaataagctttatcctttgtcatccatttctcagcaaatagaa gattttgcaaaggaaatgcttttctcagttacgagtagtgatgtttcagaattaacagat gctgaagggtccattgctgattcacaaaagggacctgatgttgaaaaggtttcaaacgaa caatcatcattgagtggcagcactaaagatgtttcggataatcgtcaatcatgcacatct gagagtgtctcaccagattcagtttctgaggctcagaggtgcatgtcattgtattttgct ttgtgtacaaagaaacattctctctttcgccaaatatttgtcatctatagaagcacatca aaggcagtgaagcaggcagtacatcgacaaatcccaatactcgtacgcactatgggctca tctcttgatctccttgaaactatttcagatcctccaaacggaagcgagaatcttctaatg caggtgttgcatacacttacagatggtacggtcccttctaaggatttaataagcaccgtg aaaaggttgcatgattcaaaactcaaggacgcagaagttcttattcctgtattaccattc ctatcaaatgaagaggtgataccgatttttcctcacattgtgaatcttcctttggagaag ttccaaacagcacttggtcgcgtattacagggatcatcacaatctggtccggtgctttct ccggctgaagttttaattgcaattcatggaattgatcctgaaagggatggaattccctta aaaaaggtgacagatgcgtgcaatgcttgttttgagcagcgacaaacttttacgcaggaa gttattgccagagttttgaatcagttggttgagcagattcctcctcctttactattcatg cgtacagtgttacaagcaattggtgcttttccatcactgggggactttatcatggggatt ctttctcgccttgtgacgaagcagatatggaaatatccgaagttgtgggtgggattcttg aagtgtgtgcagctgacgaaaccacagtcttttagcgttttgcttcagctgcctccagca caattggagaatgcattaaatagaatttcagccttgaaggcaccattgattgcacatgct agccagcaagatatacaatccaaacttccgagggctgtgctggttgttcttggacttgca tccgattctcaggtttcaagtcaagcacaaactactcaaacacaaacttctcagacacag actactcagacacaaactagtcagacacagactactcagacacaaactagtcaaacacag actactcagacacaaacaagtcaaacacaaactagtcaaacacagactggtgagacaagc aactcagacaaggacacagtgacagagaaatctaaagaatcatctaccgcgagctaa

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