Vigna unguiculata (cowpea): 114166982
Help
Entry
114166982 CDS
T06017
Name
(RefSeq) uncharacterized protein LOC114166982
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114166982
Enzymes [BR:
vun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114166982
5.6.2.5 RNA 5'-3' helicase
114166982
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114166982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
UvrD_C_2
AAA_16
ATPase_2
Motif
Other DBs
NCBI-GeneID:
114166982
NCBI-ProteinID:
XP_027907672
LinkDB
All DBs
Position
10:38478773..38486802
Genome browser
AA seq
1390 aa
AA seq
DB search
MGSRGRPLFDLNEPPAEDNDDRDGIVCIQPQKTLPSTNPHASDLFATSTAAQGIINNHAF
SHASSVSGFQPFVRPKFTGVPEPDAELKKAGDQDTKVSSKSSKDEDVKVIDSRIQSSANA
QPIEREEGEWSDEDVFANANGGNNANSNGGSNANANVGNNLAQRSQASEEVATSGMVDGG
VVVASDCKPRNLKSSDSINDEKGSHTSIGLESNSSEQKSNSIPNSESNIKSETSTDALEE
PTLVPKQKEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPI
KTSTPRRQNFSSSVVSRTIKEVRTIPAQVERVGIAKDQKLTETTSGEGGNHADAHEPKSD
SNGDTTGPLVRSRRLNSETEPPAEANLPPIPRQGSWKQLTDSRQQKNTIHSNRKLGLSGQ
SSNDVKLGNKKHLSIKKQTPISNQSQDTSVERLIREVTSEKFWHHPEDTELQCVPGRFES
VEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVH
EFKWSFKEGDVAILSSPRPGSVRSKQNNSSVAQDDGESEVTGRVVGTVRRHIPIDTRDPP
GAILHYYVGDSYDPSRVDDDHIIRKLQSGSIWYLTVLGSLATTQREYVALHAFRRLNLQM
QTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAATHTAAGTSSG
STKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEIN
SDHVPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEM
KVYRPDVARVGVDSQTRAAQAVSVERRTEQLLIKSREEIMGWMHQLKNREAQLTQQLHCL
HRDLNAAAAAVRSQGSVGVDPDLLMARDQNRDALLQSLAAVVENRDKVLVEMSRLALLES
RFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASE
VAILPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYR
MHPHIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLKPYIFYDIRHGRESHRGGSVSY
QNIHEAQFCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLY
INTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSE
DWAALINDAKSRNCYMDMDSLPKDFLVSKGPVYTSLPGKPSNMRGMRSAGPRYRAMDMHM
MDSRSGAPSEDDENMGAPIGSRNGNHRHSRFSMENSVDDFDHGGDKTRDTWQYGIQKKQN
SSGPMGKRDV
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcgaggaaggccattatttgatctcaatgaaccgcctgcagaggataatgat
gatagagatggtattgtctgcatccagccccaaaagacactcccctcgacaaatccccat
gcttctgatttatttgcaacatcaactgcagcccaaggaataataaataatcatgctttt
tcacatgcctcatctgtctctggatttcaaccttttgttcggcctaaattcactggtgtg
cctgaaccagatgctgaattgaagaaagcaggagatcaggacacaaaggtttcctcaaag
tcaagtaaagatgaagatgtgaaggttatagattcacggatacaaagttcagcaaatgcc
caacctattgagagggaagaaggggaatggtctgatgaggacgtctttgctaatgctaat
ggaggtaataatgctaattcaaatggaggtagtaatgctaatgcaaatgtagggaataat
ttggcacagcgaagtcaagcttcagaagaggtagcaacatctggaatggtggatgggggt
gttgtggttgcttctgactgtaagcctagaaatcttaaaagttctgatagtataaatgat
gaaaagggtagtcatacttctataggtctagaatcaaattcgagtgagcagaaaagcaat
agtattccaaattcagaaagcaatataaaaagtgaaacctctacagatgcactggaggaa
cccactttagttcccaagcaaaaagaagtgaaaggtattgaagcaagtcacgcacttagg
tgtgcaaataatccagggaagaggaagattgaccaacggaaagaggaaatgttgggaaag
aaacgtaatagacagacaatgtttcttaacttagaggatgttaagcaagcaggtcctatt
aaaacctcaacccctagaaggcagaatttctcgtcatctgttgtaagtcgtacaataaag
gaagtccgcactattcctgcacaagttgagcgtgttggaattgctaaggatcagaagctc
actgagactacttctggtgaaggtggcaaccatgctgatgcacatgaacctaaatctgat
tctaatggcgatactacaggaccacttgttagatccaggaggttaaacagtgaaacagag
cctcctgcagaggccaatttaccacccattccaagacagggttcatggaaacaattgaca
gattcaaggcagcagaaaaacactattcattctaataggaagttgggattgagtggtcaa
agttccaatgatgttaaattaggaaacaagaagcatctttctatcaagaagcagactcct
atcagcaaccagtcccaggacacatctgttgaacgccttatacgggaggtgaccagtgaa
aagttttggcatcacccagaggatactgagcttcagtgtgtccctggacggtttgaatca
gtggaagagtatgttagagtatttgagcctttgctttttgaggaatgccgtgctcaactt
tacagtacttgggaagagtcaacagaaacagtgtcaagggatactcatattatggtgcga
gtgaaggcgaatgagtcgagggaaagagggtggtatgatgtgaaagttcttcctgtacat
gagttcaagtggtcatttaaggagggtgatgttgcaattctttcatcccccaggcctgga
tcagttagatccaagcagaacaattcatctgtagctcaggatgatggggaatcagaagtc
actggacgagtggtcggcacggttaggcggcacatacctattgatacccgtgatcctcct
ggtgctattcttcattactatgttggagactcttatgatcccagcagggttgacgatgac
catatcataagaaagcttcaaagtggaagcatatggtacctcaccgttcttggttctctt
gctaccacacaaagggagtatgttgccctacatgcatttcgtcgactaaatttgcagatg
caaactgcaatccttcagcctagtcccgaacacttccctaaatatgagcaacagacccca
gccatgcctgaatgcttcacacagaactttgttgagtatctacgtaggaccttcaatgaa
ccccagttggcagcaatccaatgggctgctacgcacacagctgctggcacaagtagtgga
tcaacaaaaaggcaagaaccttggccatttaccctcgttcaaggacctccaggaacagga
aaaacacatacagtgtggggaatgttgaatgtcattcaccttgttcagtatcagcactac
tacacctctttactaaagcatgtggcccctgagagctacaagcaagtcaatgagattaat
tcagatcatgtacccactggatctatcgatgaagttcttcaaaacatggaccagaatctc
ttgcgaaccttacctaaactggtcccaaaacctagaatgttagtctgtgctccatctaat
gctgccactgatgagcttcttgctcgtgttctggatcgtggatttattgatggggagatg
aaagtttatcgaccagatgtggctcgagtaggggttgattctcagacacgtgctgcacaa
gcagtttctgttgagcgcagaactgaacagcttttaatcaagagtcgggaagaaattatg
ggatggatgcaccagttaaagaatcgtgaggcacagttgactcagcagttgcattgtctc
cacagagatcttaatgctgctgccgctgctgttcgttcccaaggatctgttggtgttgat
cctgaccttctcatggcccgagatcagaatcgagatgctttgctacaaagccttgctgct
gtggttgaaaaccgggacaaggttctggttgagatgtctcgcctagctcttcttgaaagt
aggtttcgacctggtagtggatttaatttggaagaagcccgtgctagtttagaggccagt
tttgcaaatgaagcagagattgtttttactacagtttctagcagtggccggaagttgttt
tctcgcctttcccatggttttgatatggtggtcattgatgaggcagcccaagccagtgag
gtggcaattctgcctcccctctctctcggtgcagctcggtgtgttcttgttggagatcct
cagcagcttcctgctacagttataagcaaggctgctggaacattgatgtacagtaggagt
ctttttgaaaggttccaacaagcaggttgcccgacaatgttgttgtccgtgcagtataga
atgcaccctcatattcgggatttcccttctaggtacttctatcaagggcggcttaccgat
agtgaaagtgtggctaaacttcctgacgagccatactacaaggaccctttacttaaacct
tatatattctatgatatcagacatgggcgcgagtctcacagaggtggatcagtctcttat
caaaacatacatgaagcacaattttgtctcagattgtatgagcatgttcagaaaacagtc
aagtctttgggtctaggaaaaattactgttggcataattactccatataagctgcaattg
aaatgcctccagcgtgagtttgacgaagtcttaaattcagaagaagggaaggatctatat
atcaatacagtagatgctttccaaggtcaagaacgagatgtcattataatgtcctgtgtc
cgtgcatctagtcacggtgttggctttgttgcagatattcgtcggatgaatgttgccctt
acacgtgcaaggagggccctttgggtcatgggaaatgcgaatgctctggtgcaatctgaa
gattgggctgcattgattaatgatgctaaatctcgaaattgctatatggacatggactct
cttcctaaagacttcctggtgtcgaagggacctgtttacacatcattgcccggtaagcct
tcaaatatgaggggcatgagatcagctggaccaagatatagagcaatggatatgcatatg
atggattccaggtcgggagcaccatctgaagatgacgagaatatgggtgctccaattggc
tccagaaacgggaaccatcgccattcacggttttcaatggagaattccgtagatgatttt
gatcacgggggtgacaaaacaagagatacttggcagtatggtatacagaagaagcagaac
tcatctggacccatgggaaagagagacgtataa
DBGET
integrated database retrieval system
