Vigna unguiculata (cowpea): 114167193
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Entry
114167193 CDS
T06017
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114167193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114167193
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114167193
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114167193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
114167193
NCBI-ProteinID:
XP_027908001
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All DBs
Position
10:complement(40867556..40869019)
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AA seq
281 aa
AA seq
DB search
MPLILPKSDSIQIREVWNDNLEEEFALIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYD
YHYQTLKDNVDMLKLIQLGLTFSDEYGNLPTCATDVDDDSHTCCIWQFNFREFNVNEDVF
ANDSIELLRQSGIDFKKNNEDGIDARRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKL
LTCQNLPDTQAEFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAG
SDSLLTSCTFRKLKDNFFSGSLEKYAGVLYGLGVENGQGAH
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgattttacccaaaagcgattcgatccagattcgcgaggtgtggaacgataat
ctggaagaggaattcgcgttgattcgcgaaatagtggacgattacccttacatagcgatg
gacacggagtttccggggatagttctccgaccggtggggaatttcaagaacagctacgat
taccattaccaaaccctaaaggacaacgtcgacatgctcaagctcatccaattggggctc
acattctcggacgagtacggcaaccttcccacgtgtgccaccgacgtcgacgacgattcc
cacacgtgctgcatctggcaattcaatttccgggagttcaacgtcaacgaggacgtcttc
gccaacgattccatcgagcttttgcgccagagcggcatcgatttcaagaagaacaacgag
gacggcatcgacgcccgccgtttcggggaacttctcatgtcctccgggatcgttttgaat
gacaacgttcattgggttactttccatagcggttacgatttcgggtacttgttgaagctc
ttgacgtgtcagaatttgcccgatacgcaagcggagtttttcaatctgatcaacatgtat
tttcccaccgtatacgacatcaagcacctcatgaagttctgcaacagccttcacggcggt
ttgaacaagctcgccgagttgttggaggtcgaaagggtcggaatttgccaccaggctggt
tccgatagtttgctcacttcatgtacgttcaggaaattgaaggacaatttctttagtggc
tcgttggagaagtatgctggtgtcttgtatgggttaggtgttgagaatggacagggagcc
cattga
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