Vigna unguiculata (cowpea): 114167291
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Entry
114167291 CDS
T06017
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13 isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vun03009
]
114167291
Enzymes [BR:
vun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114167291
Ribosome biogenesis [BR:
vun03009
]
Eukaryotic type
Pre-60S particles
Helicases
114167291
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114167291
NCBI-ProteinID:
XP_027908139
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All DBs
Position
10:33256220..33268188
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AA seq
803 aa
AA seq
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MEAAAVATSSLKKLKRKRTVARSDPELERLNSLPWNSSLPQNDDDGAFSLFIGTNELEGG
FLSLEEIDEAEYGLDIPEPEDGKRKTKKKKSIQNEDVKKQQQDGVDGASSDEVEAELDES
VKAKEKKKKKKKKTKKKDATDGQKVEQPDAGLDANVEDGNGEEDSDETEFYAWNELRLHP
LLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRILEEREK
DANMVEEPGKYSPKGVLRALIIAPTRELAVQVTDHLKAVAKYINVRVTPIVGGILAEKQE
RLLKAKPEIVVGTPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVQSGHFKELQSIIDM
LPMSNISTEDNSQNVQKGCVTVSSYQRKKRQTLVFSATVALSSDFRKKLKRGSSQKKQSS
TDGLNSIETLSERAGMRSNAAIIDLTNPSILAAKLEESFIECKEEDKDAYLYYILTVHGQ
GRTIVFCTSIAALRHISSILRILGINVWTLHAQMQQRARLKAIDRFRENENGILVATDVA
ARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPRDTSKFASLCKSFS
KDNFQRFPLENSYMPEVLKRLSLARQIDKITRKDSQVKAEKSWFDRNASAVELVTENYDS
EEEQVNKHKQMKASSRQLKKLQEELNMLISRPLQSKSFSHRYLAGSGVTPLMQEQLQQLA
RQKLSDHQGSTLGKKGKLVVIGQDCMDALQALRSAGEEVRMDIKDFAGKQRNVENLKRKR
KEEKKRLRDQRRKQKKKLKYGDE
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagcagcggtagcaacctcttctctgaagaagctgaagcggaaacgcactgtg
gcaagaagcgatcctgaactcgagcgtctgaactcgcttccgtggaactcttctcttcct
cagaacgacgacgatggcgctttctccttgttcattggcaccaacgaactcgaaggaggg
tttctttcgctcgaggagattgatgaggcggagtatggtttggatattcctgaacctgaa
gatggcaagaggaagacgaagaagaaaaaatctatacagaatgaagatgtgaagaaacag
cagcaagatggagttgatggtgctagtagtgacgaggtcgaagctgagttggacgagagt
gtgaaggctaaagagaagaaaaagaagaagaagaagaagacgaaaaagaaggatgctacg
gatggccagaaagttgagcagccagatgctggtttagatgctaatgtggaagatggtaac
ggtgaagaggacagtgatgaaactgaattttatgcatggaatgagttgaggcttcaccct
ctcctaatgaaagcaatttacaagcttggcttcaaggaaccaacaccaatacagaaggct
tgcattccagctgctgctcatcaagggaaggacgttgttggggctgcagagacaggatct
ggtaaaacactggcgtttggtttgcccattttgcaacgcattttggaggagagagaaaag
gatgcaaacatggttgaagaacctggaaagtattctcctaaaggagttttgagggctctt
attattgctccaactagagaacttgcagttcaggtcacggatcatctgaaagctgttgct
aagtatattaatgttcgggtgacccctatagttggggggattttagcagaaaagcaggag
agacttttaaaagcaaagcctgagattgttgttggaactccagggaggttatgggaactt
atgtcagctggagaaaaacatctagttgagttacattcactctctttctttgtgcttgat
gaggctgatcggatggtacaaagtggtcattttaaggagttgcagtctataattgatatg
cttcccatgtccaacatctccactgaagataattctcaaaatgtacaaaaaggttgtgtt
acagtttctagttaccaaagaaagaaaagacaaacacttgttttttcagcgactgttgca
ctgtcttctgattttcgcaagaagctaaaacgtggctcaagtcaaaaaaagcaatcatca
acagatggattgaattcaatcgaaactctttctgagcgtgcaggaatgagatccaatgct
gcaattattgatcttactaatccatctatattagcagctaagcttgaggagtcatttatt
gaatgcaaagaagaagataaagatgcatatttgtattatattttgactgtccatggacaa
ggtcgcaccatagttttctgcacgtcaattgcagccttacgtcatatttcttccatatta
cgcattcttggaatcaatgtttggactcttcatgctcaaatgcagcaacgagcacgattg
aaggccattgatcgctttcgggaaaatgaaaatggcatacttgttgctacagatgttgct
gccaggggtcttgatattcctggtgttagaactgttgtccactatcagcttccacattca
gcagaggtttatgttcatagaagtggaagaacagccagggcctccgctgaaggttgtagc
attgctttaatatcaccaagagatacgtccaagtttgcttcactgtgcaaatcattttct
aaggataactttcagcggtttcctttagagaactcttacatgccagaggtcctaaaaaga
ctgtctcttgcacgacaaatagacaagataacaaggaaggattcccaggtaaaggcggag
aaaagctggtttgatcggaatgctagtgcagttgaattagttactgaaaattatgacagt
gaagaggagcaagtgaacaaacataagcaaatgaaagctagttctagacaattgaaaaaa
ttgcaggaggagctcaatatgctgatttctcgcccattacaatcaaaatcattttcacat
cggtatttagcagggtctggtgtcacacccctcatgcaggagcaattgcaacagttagca
aggcaaaaactaagtgatcaccaaggttctactctaggcaaaaagggaaaattggttgtg
attggtcaagattgcatggatgcacttcaagctcttcgaagtgctggcgaagaggtgcga
atggatatcaaggattttgccggaaaacagagaaatgtggagaatttaaaaaggaagcga
aaagaggagaaaaaacgtttgcgtgatcagcgtagaaagcaaaagaaaaagctaaaatac
ggggatgaatag
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