Vigna unguiculata (cowpea): 114167345
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Entry
114167345 CDS
T06017
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114167345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vun04131
]
114167345
Membrane trafficking [BR:
vun04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114167345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
ANAPC4_WD40
TPR_VPS8_2
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_WDHD1_1st
zf-RING_Vps41
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
114167345
NCBI-ProteinID:
XP_027908212
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All DBs
Position
10:37158453..37172625
Genome browser
AA seq
1916 aa
AA seq
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MEPDIRSLLNSASSSASSSDADDDAPHRTIDEILNDCDTSSSSTSPPSSPSHSLSPLTNS
HPQNPTLQPKPLQPALDSISRLKPPEFSDRTRVSRPFSSLLQGVRSNAKPGAALAAAAAA
SRSVPTPHAAAIISKRKSAAAISTELSSITAAGDDYSDVSSKGELGELSEKYDPVPLKIE
TQSSESASVNGERVESDTDIVIDLKAGSAADNQVHSDTDNDNGDGDDDGNGNYNDSSIVS
EENRNLDEVDGYHGKDMNSSTFDEDTKDRDLDGNDGADKRITATDSAVETEETVDNGDSS
VDHVKNEMSGGGSDEGSSLGDVSELVEERLEELESRRAAKRAEKKREFSMKPLELAEKLE
KKRASTGLHLEEGAAAQPMRLEGVRRGSTTLGYFDVDADNAVTRAISSQTFRREQGSARA
LAVHANYIAVGMSKGLIVVFPSKYSIHHADSSDGKMLMLAIQGDRLRAPVTSMSFNQQGD
LLLAGYGDGHLILWDVQKGVVAKVISGEHTAPVVHTLFLGQDPQNTRQFKAVTGDCKGLV
LLHIISVVPLFSRFSIKTQCLLDGQSTGLVLSASPLLFDDFSGSASPFSQGNTSTPASSI
SSMMGVVGGDAGWKLFNESSSLLEEGVVVFVTHQTALVVRLSPTLQVYAQLSRPDGVREG
SMPYTAWKYMTQTHSSTENMSAEAIERVSLLAIAWERKVLVAKLVKSELKVYGKWSLEGA
AIGLAWLDDQMLVVQTSSGQLYLFSKDGTVIHQTSIAIDGIGGDDLVSYHTHFINVFGNP
EKAYHNSVAVRGASIYILGPTHLLISRLLPWKERISVLRKAGDWMGALNMAMTLYDGHAH
GVIDLPRTLDAVHEAIMPFLVELLTSYVDEVFSYISVAFCNQIGKVDQSNDSNSRSNSMH
CEIKEQYTRVGGVAVEFCCHVKRMDILFDEIFSKFVGVQQRETFLELLEPYILKDMLGSL
PPEIMQELVEYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYVFNKGLD
DFRAPLEELFAVLQNSQKESATALGYRMLVYLKYCFTGLPFPPGRGTIPPTRLPSLRREL
VEFLLKDSCTSKSQTISDFESRRPHLNLYLLLKLDTEATLDVLRCAFMEDEISNACSSSP
DSVNKPIEEAKKEDKATETQNALVQNTVDALIQIIDMNIVQTDTTFSSGEDGLIKEWPSK
DIGYLFEFIAYYVAIQRAKISKDVLCQILEYLTSDSHSSTNISVHCSTPKNREKQVLALL
EVLPKSDWDPSFVLDLCERAKYHQVCGLIHSFRHEYVAALDSYMKDVDEPIHTFSFINKT
LSHLTDNEHVAFRSAVILRIPELVELSREGAFHVVLGHFSEESSHIITELHSHPRSLFLY
LKTLIEFHLFGTLDLSNLSKDDTMNPLNGRQVKDHSEGVRDYLENISKFPKFMREKPIHV
PDDLIELYLELLCRYEGSSVLKFLEMFDSYRVEHCLRLCQEYGIIDATAFLLERVGDVGK
ALSITLSDLNDKFVKLDAAVEAVVLNHSRVGSSHVEVFDSVLRTKEGSDIHDLLRACIGL
CQRNTPRLNPEESEAHWFKLLDSFCDPLIDSNVEGAYESKNHFGMLAGSADSQQDKDAYK
SSWKISKSRNGHILRKLLSQFIKEIVEGMIGFVHLPTIMSKLLSDNGSQEFGDFKLTILG
MLGTYGFERRILDAAKSLIEDDSFYTMSLLKKGASHGYAPRSLVCCICNCLLTKNSGSSG
IRIFNCGHAIHLQCEVSEIEASSRGSSSGCPLCVPNKKSQQSRNKSIIATNGLVNKFSSK
RQYPHGSSLHPHDSDLTENMYGQQQISRFEILSNLQKNQRFMQIENLPPLKLAPPAVYHE
KVSKVANFLTGESSNNSSAIEKQSRNKQNRELRVKGSSIRFPLKSSIFGKEKTNKR
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgacatccgttcactccttaactctgcctcctcctccgcttcttcctccgac
gccgacgacgacgctccccaccgcaccatcgatgaaattctcaacgactgtgacacttct
tcttcctcaacctctcctccttcctctccctctcactctctctctccactcaccaattcc
catcctcaaaaccccactcttcaaccaaaaccactccaacctgcactcgattcaatttct
cggctaaaaccacccgaattctccgaccgcacacgcgtttcgcgtccgttctcttctcta
ctacagggcgtgcggtccaatgcgaagccgggcgccgcgctcgcggctgctgctgcggcg
tctcgatccgttcctacgccgcacgcggcggcgatcatttccaagaggaaatctgcggcc
gcgatcagcactgagttgagttcgatcactgccgctggcgacgattattccgatgtttct
tccaaaggggaattgggcgagcttagcgagaaatacgatcctgtgccgctgaaaatcgag
actcagtctagtgaaagtgcttctgttaacggcgaacgtgttgagagtgatacagatatt
gtcattgatttgaaggctggtagtgccgctgacaatcaggtgcatagtgatactgataat
gacaacggggatggcgatgatgatggaaatggcaattataatgattcttctatagtgagt
gaggagaataggaatttagatgaggttgacggttaccatgggaaggatatgaattcttca
acgtttgatgaagatactaaagatcgtgacttggatggcaatgatggtgctgataagaga
atcacagctacggattcagctgtggaaacagaagaaacggtggataatggtgacagctct
gtggatcatgttaaaaatgagatgagtggtggcggtagtgacgagggtagttcattgggt
gatgtttcagagttagtggaagagaggcttgaggaattggaaagcagaagggctgctaag
agagcagagaagaaacgagagttttcaatgaaaccacttgaattggctgaaaaacttgag
aaaaagcgagcttcaactggtttgcatttggaagagggtgctgctgcccagccaatgaga
ctcgagggcgttaggagagggtccacgacgttgggatactttgatgttgatgctgataat
gcagtcaccagggcaatttcgtcccaaacattcaggcgcgagcaaggttctgcccgagcc
ttggcagttcatgctaattatattgcagtaggaatgtcaaaagggctcattgttgtcttt
cccagtaaatattccattcatcatgctgatagctctgatggaaagatgttgatgcttgct
atacaaggtgatcggttgcgtgctccggtgacatccatgtctttcaatcaacaaggagac
cttcttttagctggttatggtgatggtcatcttatcctgtgggatgtacagaaaggggtt
gtagcaaaagttattagtggtgagcatacagcaccagtagtacataccttatttctaggt
caagatcctcagaatactcgtcaatttaaagcagttactggtgattgtaagggtctggtt
ctcctgcacattatctcggttgttcctttgtttagcagattctccatcaaaactcagtgt
cttcttgatgggcaaagtacaggcttggtgctttcagcttcaccactcctttttgatgac
ttcagcggaagtgcttcacctttttctcagggaaacacctcaaccccagccagcagtata
agcagcatgatgggtgttgttggtggagatgcaggttggaaactcttcaatgaatcctct
tctttgttggaagaaggtgtggttgtatttgtaactcatcaaactgcactggtggtacgg
ctgagccctacattgcaagtctatgcacaactctctaggccagatggggttcgggagggg
tccatgccgtatactgcatggaaatacatgacacaaacacatagttctactgaaaatatg
tctgcagaagctattgaaagagtttcattgcttgcaattgcttgggaacgtaaggttctg
gttgcaaagttggtgaaatcagaactaaaagtatatggaaagtggtctctcgaaggtgcg
gctataggtctagcatggttggatgatcagatgctggtagttcaaacttcaagtggacaa
ctgtatttattttccaaggatggaactgtgattcaccaaacaagtattgccatagatggt
attggaggagatgatctagtctcttatcatactcacttcatcaatgtattcggaaatcct
gaaaaagcttatcataactctgttgctgtaagaggagcttctatttatatacttggtcca
acacatcttctcatttctcgtcttctaccttggaaagagcggatttctgttttgcgtaaa
gcaggtgactggatgggtgccttgaacatggcaatgactctttatgatggccatgctcat
ggggttattgatcttcctagaaccttggatgccgtacatgaggccataatgcccttctta
gtggagttgcttacatcatatgttgatgaagtgttctcctacatttcagtggcgttttgc
aaccaaataggtaaagtggaccaatccaatgattcaaatagtagaagcaattcaatgcat
tgcgagataaaggagcaatacacccgtgttggtggggttgctgttgaattttgttgtcat
gtcaaacggatggacattctttttgatgaaattttctccaagttcgtgggtgttcaacag
cgagaaacatttttggagcttctggagccatatattttgaaagacatgcttggatctcta
cctcccgagatcatgcaagaattggttgagtattatagtaccaaagggtggttacagcgg
gttgagcaatgtgtacttcatatggatatatcatccttggattttaatcaggtcgtcagg
ttatgccgggagcatggactttatagtgcactggtttatgtcttcaataaaggattagac
gattttagggcacctctcgaggagctgtttgctgtcttacaaaatagccaaaaggaaagt
gctactgcacttgggtatagaatgctggtttatctcaagtactgctttacaggtcttccc
tttccaccaggccgtgggactattcctcccacacgcttaccttctcttagaagagaactt
gtggagtttttgttaaaggactcctgtacttcgaaatctcagaccatttcagactttgag
tccagaagaccccacctgaatctttatcttcttttaaagttagacactgaagctacctta
gatgtcctcagatgtgcttttatggaagacgaaatttcaaatgcctgttcatcttcacca
gattcagtcaataaacctatagaggaagcaaaaaaagaagataaagctactgaaactcaa
aatgctttggttcagaacacagttgatgcactcattcaaataattgatatgaatattgtt
cagacagatacaacctttagtagtggtgaagatgggttgataaaagagtggccttcgaag
gacataggttatctatttgagttcattgcatattatgttgctatccaaagagctaaaatt
tcaaaggatgtactgtgtcaaatattggaatatttgacatctgatagtcactcctctacc
aatatttctgttcattgctcaactccaaaaaacagagagaagcaagtgctagcacttttg
gaagtacttcctaagtcagactgggatccatcatttgtgttagatctatgtgaaagagcc
aaatatcatcaggtttgtggattgatccatagtttcagacatgaatacgtggctgcactg
gatagttatatgaaagatgtagacgagcctattcataccttttcctttattaataaaaca
ttatcacacttgactgacaatgagcatgtagcatttcggtccgcagtcatattgcgaatt
cctgaattggttgaactaagcagggagggtgcattccatgtggttctcggtcattttagt
gaagaaagttcccatatcataactgaacttcactctcatccaagaagtctttttctttat
ttgaagacgctcattgagtttcacttatttggcaccctagacttgtctaatttgagcaag
gatgacactatgaatcctcttaatgggaggcaggttaaggatcactctgaaggagttaga
gattacttagagaatatatccaagttccccaagttcatgcgggaaaaacctattcacgtg
cctgatgatcttattgagctttaccttgagttactatgccggtacgaaggtagttcagtt
ctcaagtttctggaaatgtttgatagctatcgagttgaacattgtttacgtctctgtcaa
gaatatggcattatagatgcaactgcgttcttactagaaagggttggtgatgttggtaaa
gctctttcaattacactttctgatctaaatgataaattcgttaagcttgatgctgctgtg
gaagctgtagttttaaaccatagcagagttggttcttcacatgtggaagtattcgacagt
gttttaagaacaaaagagggaagtgacatccacgatttattgcgtgcctgtattggtctg
tgtcagcggaacacccctcgtctaaatcctgaggagtcagaagcgcattggtttaaatta
cttgattcgttttgtgacccattgatcgattcaaatgttgaaggagcatatgaaagtaaa
aatcattttggaatgttagctggatcagcagattcacaacaggacaaggacgcctataaa
agcagctggaaaatttcaaagtcccggaatggtcatatcttgagaaaattgctatcacag
ttcattaaagagattgtagagggaatgattggttttgttcaccttccaacaatcatgtct
aaacttctgtctgataatggtagtcaagaatttggtgattttaaacttacaatattggga
atgctgggaacatatggcttcgaaagaagaattctggatgctgccaaatcgttgatagaa
gatgactcattctatacaatgagtttactcaagaaaggggcctcccatggatatgccccc
aggagtctcgtgtgctgtatttgtaattgccttcttacaaagaactctggtagctctgga
attcggattttcaactgtggccatgcaattcatctccaatgtgaagtttcggaaattgag
gcatcaagcagaggatcttcgtcgggatgccctctgtgcgtgcctaacaagaaatcccag
cagtcccgaaacaaatcaatcattgcaacgaatggcttggtcaacaaattctcatcgaag
cgccagtacccccatggaagttccctccatcctcatgacagtgatttgacagagaatatg
tatggacaacaacagatatcacggtttgagatcttgagcaacctgcagaaaaatcagagg
tttatgcaaatagaaaacttgcctccgttgaagcttgccccgcctgctgtgtaccatgaa
aaggtaagtaaagttgcaaactttctgacaggcgaaagtagcaataattcttctgctatt
gagaaacaaagtagaaacaagcaaaaccgggagctaagagttaagggttcatcaatccga
tttcctttaaagtcaagtatatttggcaaggagaagacaaataagcggtga
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integrated database retrieval system
