Vigna unguiculata (cowpea): 114168726
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Entry
114168726 CDS
T06017
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114168726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114168726
03009 Ribosome biogenesis [BR:
vun03009
]
114168726
04131 Membrane trafficking [BR:
vun04131
]
114168726
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vun04147
]
114168726
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
114168726
Ribosome biogenesis [BR:
vun03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
114168726
Membrane trafficking [BR:
vun04131
]
SNARE
SNARE associated proteins
Others
114168726
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114168726
Exosome [BR:
vun04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114168726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Viral_helicase1
ABC_tran
NACHT
AAA_7
Vps4_C
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
AAA_lid_PRS2_C
Zot
Motif
Other DBs
NCBI-GeneID:
114168726
NCBI-ProteinID:
XP_027909437
LinkDB
All DBs
Position
11:34651351..34655840
Genome browser
AA seq
804 aa
AA seq
DB search
MSHHAESSDSKSVKKDFSTAILERKKSSNRLVIDEAVTDDNSVVSMHPQTMEKNQFFNGD
TILIKGKKRRNTVCIVLADEKCEEPKLRMNKVVRSNLRVLLGDVVSVHSCSDVPYGKRVH
ILPIDDTIEGVTGNLFDAYLKPYFLEAYRPIRTGDLFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDENIDAEILNSMAVSNEHFLTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQI
FKACMRKSPVSKEVDLGALAKYTQGFSGADITEICQRACKYAIRENIEKDIELEMKRKEN
PEAMDEDNEEDVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSDFRFPE
TGGSTGGSDPFATSAAVAEDDLYS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccatgctgaatcgtccgactcgaaatctgtgaagaaagacttctccacagcg
attctcgagcggaaaaaatcttctaaccgattggtcatcgacgaagcggttaccgatgat
aactcagtggtttccatgcaccctcaaaccatggagaaaaatcaattttttaacggtgat
actatcctcatcaaggggaagaaacgtaggaacacggtttgcattgttcttgcagacgag
aaatgtgaggagccgaagttaaggatgaacaaagttgtgaggtcgaatttgagggttctt
cttggggatgttgtgtctgtgcattcgtgctctgatgttccgtatgggaagcgagtccac
attcttcccattgatgataccattgaaggtgtcactggcaatctctttgatgcatatttg
aaaccatatttcttggaggcttatcgtcctatcagaacgggagatctatttttggttcga
ggagggatgagaagtgtagagtttaaggtaattgaaactgatcctggggagtattgtgtg
gttgctccagacactgaaatattctgtgagggggaacctgtgaaaagagaggatgaagaa
aggcttgatgatgttgggtatgatgatgtgggtggcgtcaggaagcaaatggcacagatt
cgtgagttggtagagcttcctcttaggcacccacaactttttaaatcaattggtgtgaaa
ccacccaaaggaattctgctgtatggacccccaggatctggtaagaccctgatagcaaga
gctgtggctaatgagacaggagcgttcttcttttgtatcaatggaccagagattatgtct
aaacttgctggagagagtgaaagcaaccttaggaaagcatttgaagaagctgaaaagaat
gccccctccatcatatttattgatgagattgattctattgcacccaagcgggagaaaaca
aatggtgaagttgaaaggaggattgtttctcaacttttgacacttatggatggattgaaa
tcccgtgcacatgttattgttattggagctacaaataggccaaatagcattgaccctgca
ttgagaaggtttggtagatttgacagggaaattgatattggtgttcctgatgaagttggg
agacttgaagtccttcgcatacataccaaaaacatgaagctttcagatgatgttgatttg
gagagaatttcaaaagatactcatggatatgttggtgccgaccttgctgccctttgcact
gaagctgctctgcaatgcatccgggagaagatggatgtcattgatttggaagatgagaat
attgatgctgaaatactgaattctatggcagtttcaaatgaacatttcctcactgcttta
ggaactagcaatccatctgctttacgtgaaactgttgtcgaggtgcctaatgtcagctgg
gaagatattggaggtcttgagaatgtcaagcgtgagctgcaagagactgttcaatatcct
gtggagcaccctgaaaaatttgagaaatttggtatgtcaccatcaaaaggagttctgttc
tatggtcctcccggatgtgggaaaactttgttggccaaagcaattgctaatgaatgtcaa
gctaacttcatcagtgtgaaaggcccagaattgctcactatgtggtttggtgaaagtgag
gccaatgttcgagaaatttttgacaaggccagacaatcagctccatgtgtcctcttcttt
gacgagcttgattctattgctacccagagaggaagtagtgttggggatgctggtggagct
gctgacagagttctgaatcaacttctcactgaaatggatggcatgtctgctaaaaagact
gtgttcataattggggcaaccaacagacccgacatcattgacccagcacttctacggcct
ggccgtctagatcaactgatctatattcctctccctgatgaagaatcccgttatcaaatc
ttcaaggcatgcatgaggaagtcacctgtctcaaaagaggttgatttgggagcactagct
aagtatactcaaggctttagtggtgctgatataacagagatatgccagcgggcatgcaag
tatgctattagagaaaacatagaaaaggacatagagcttgagatgaagagaaaagaaaac
cctgaggccatggatgaagacaatgaagaagatgttgcagagatcaaggctgctcatttt
gaagagtcgatgaagtttgcgcgtaggagtgttagtgatgctgatatacgtaaataccag
gcatttgctcagaccttacagcaatcccgtggctttggaagtgattttaggtttccagag
actggtggttcaacaggtggatctgacccctttgcaacttctgctgctgtggctgaagat
gatctgtatagttag
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integrated database retrieval system
