Vigna unguiculata (cowpea): 114168947
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Entry
114168947 CDS
T06017
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114168947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114168947
03036 Chromosome and associated proteins [BR:
vun03036
]
114168947
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114168947
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114168947
PBAF complex
114168947
GBAF(ncBAF) complex
114168947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
114168947
NCBI-ProteinID:
XP_027909735
LinkDB
All DBs
Position
11:37980174..37987303
Genome browser
AA seq
1036 aa
AA seq
DB search
MEEKRREPAPSAADSPASEPASSRRRAGANKRKSAALNASGSSSAPSKRAARDKASPLHP
PPLHNGPLTRARQTPNSLAAASSSAAASAPAAVKHSERTHPSAADSAALAEQLRKESEWE
TLEAAIEAEFEALRSRGANAHVVPTHCGWFSWLYIHEIEKQMLPSFFNGKTENRTPDVYM
EIRNWIMKKFHSNPNVQIEMKDMSQLNVGDMDARQEVMEFLDYWGLINFHPFPSMDSAVA
TASDDGEAEKSSLLEKLYHFETLQLCRPVQRSSQMTPATASGLFPESTIAEELVKQEGPA
VEMLEYHCNSCSADCSRKRYHCQKQADFDLCSDCFSNRRFGSGMSSLDFILMEPAEVAGV
NGGKWTDQETLLLLEALELYKENWNEIAEHVGTKTKAQCISYFVQMPIEDTFAEFDDNID
AGCKEPTDPVATNNDSSMDKDASECIENDTSDGIKDQDKNSKAEDVEVKVNQEENLKLQE
GSDEKASEGTSKSEDAVKVKSDQEAGNECAINALKEAFAAVGYSLGPDGPSSFAEVGNPV
MALATFLAHLVGTDVAVASAHSSIKSMSRNSPGTDLAARCCFLLEDPPDHKNEPTSSEKD
SKSEGDQDEVNVKKDKPMLDDKDLPNDHSNMKVVSDTLEDKGQAASTDGAASAEKPISPK
EQPMVNHESGLDNCNVPISAKLSNDQAPDTLHDSGGSTSKAETKSNSDQVQEGSLIEEPC
PAKVISVSDSLPSEKKELQPLKSNLPEESPKLVETSKCEIVSDSIPPTKNKSQNPQSTNP
VCESVETTDSAMDVEGVSNSLPPEKVDSQALLTTKSSQCNGTEKDVDMSPSDPVRQNSAA
ENCANTGTGKDHADNGAKVEDNDTRIKQDSNFEKMKRAAVSTLAAAAVKAKVLANQEEDQ
IRQLTSLLIEKQLLKLETKLAFFNDVENVVMRAREHVERSRHKLYHERALIIASRLGIPA
SSSRGIPPTISTNRIPTNIANSLPRPQMMMSPQRPLLSRPAATAATTLQNPLASSTAVGN
SVRPSNQEKLSSVGTK
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacgccgcgaacctgctccctccgccgcagattccccggcatcggagccc
gcatcgtctcgccgccgtgccggggccaacaagcgcaagtccgctgctctcaacgcctcc
ggttcctcttccgccccctctaaacgcgccgctcgcgacaaggcctcgccgctccaccct
cctcccctccacaatggccccctcacccgggcccgccaaacccccaactccctcgccgcc
gcttcctcgtccgccgctgcttccgctcccgccgccgtcaaacactccgaacgcacccat
ccctccgctgcagactccgccgcgctcgccgagcagctgaggaaggagagcgagtgggag
actctggaggccgcgattgaagcggaattcgaagccctcagatctcgcggtgccaatgcg
cacgtggttcccactcattgcggttggttttcatggttgtatattcatgaaattgagaag
caaatgttaccttctttctttaatggaaaaactgaaaatcggacgcctgatgtatacatg
gagatacgaaattggataatgaagaagtttcattcaaatccaaatgtgcaaattgaaatg
aaagatatgtcacagcttaatgttggagacatggatgctaggcaagaggtaatggagttt
ctggattattggggtttaattaacttccacccattcccttcaatggattctgctgtggcc
actgccagtgatgatggagaagcagaaaagagttctttgcttgaaaaattgtatcacttt
gaaactctgcaattatgtcgacctgttcaaaggtctagccaaatgactccagctacagcc
tctggcttgtttccagagtctactattgctgaagagttggtgaaacaagaggggccagct
gttgagatgcttgagtaccattgcaattcatgttctgctgattgttctcgcaaacgttac
cattgccagaagcaggcagattttgatctgtgttccgactgctttagtaatagaagattt
ggctctggcatgtcttcattggattttatactcatggaaccagctgaagttgcaggggtt
aatggtggaaagtggactgatcaagagacccttctgctacttgaagccttagaactttat
aaagaaaattggaatgaaattgctgaacatgttggaacaaaaacaaaagctcagtgcata
tcgtactttgttcaaatgccaattgaggatacctttgctgaatttgatgataatattgat
gctggttgcaaagaaccaacagatccagttgcaacaaacaatgactcatctatggacaag
gatgcttcagagtgtattgagaatgatactagtgatggcatcaaagaccaggataaaaat
tccaaggctgaggacgttgaagtgaaggtgaatcaggaggagaatctaaagttacaagaa
ggtagtgatgagaaagccagtgagggaacttccaaatctgaagatgctgttaaggtgaag
tctgatcaggaagcaggcaatgaatgtgctataaatgctctcaaggaagcatttgctgct
gttggttattctcttggacctgatggaccttcttcatttgctgaagtgggtaatcctgtc
atggcactggcaacgttccttgcacacttggtgggtactgatgtggctgttgcttcagct
catagttccataaaatccatgtcaagaaattctcctggcactgaccttgctgcaaggtgt
tgctttcttctagaagatccgccagatcataagaatgaaccaactagttctgagaaggat
tctaaaagtgagggagatcaggatgaagtaaatgtaaagaaggacaaaccaatgttggat
gataaagatttaccgaatgatcacagtaatatgaaagttgtaagtgacactttagaagac
aagggacaggcggcttccacagatggtgcagcctcagcagaaaagccaatttctccgaag
gagcaaccaatggttaatcatgaaagtgggcttgacaattgtaatgttcctatcagtgca
aagctatccaatgatcaagcaccagacactctgcatgattcaggtggttcaacatccaag
gctgaaactaaatctaattctgaccaggttcaggagggatccttaattgaagaaccttgt
cctgcaaaggtcatatctgtgtctgattctcttccatcagagaagaaagaacttcagcca
cttaaatccaatttaccagaagagtctccaaagctagtagagacatcaaaatgtgagata
gtctctgactctattcccccaactaagaacaagtctcaaaatccacaatctacaaatcca
gtttgtgaatctgtagaaacaacagactcagccatggatgttgaaggagtttctaattcc
ttgccgccagaaaaggttgactctcaggcactattaacaacaaaatcatcccaatgtaat
gggacagaaaaggatgtagatatgtcaccatcagatccagttagacaaaattctgctgct
gaaaattgtgcaaatacagggacaggtaaagatcatgcggataatggagcaaaagtggaa
gataacgatacaaggattaaacaggacagcaattttgagaaaatgaaacgggctgcagtt
tctacacttgctgcagccgcagtaaaagcaaaagttctagcaaatcaggaagaagaccaa
atccgacagcttacttccttgttgatagaaaaacagttgctcaagttggaaactaagttg
gcttttttcaatgatgtggagaatgtggtgatgagggcaagggagcatgtagagcgatcg
aggcataagctttatcacgagcgtgcgttgattattgcatcgcggcttggtataccagct
tcgtcctctagaggtataccaccaactatatcaactaatagaattcctacaaatattgcg
aactcactcccaagaccacaaatgatgatgagtccacaaaggccacttctttctagacct
gcagccactgcagctacaactcttcaaaacccattagcatcttcaactgcggtaggaaat
tccgttcggccatctaaccaggaaaaactttcttctgttgggacaaaataa
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