Vigna unguiculata (cowpea): 114169050
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Entry
114169050 CDS
T06017
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114169050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vun03400
]
114169050
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
114169050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CheR_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
114169050
NCBI-ProteinID:
XP_027909869
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Position
11:627408..633505
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AA seq
901 aa
AA seq
DB search
MESSVDVLSAKRCRSTGSPCGPDTGKRQKLSDVADHTNPSAISDVVVRIEHGKFGSVTKE
IEDLVAIKMQILGPYFAKYPVLVNEFRNVVTDHDEDTTKFEDQQDTGLTYHDVIDLEVEN
FEKDVRAAPVPVIHIDSDGEGDEDKNAIVPFHEASEVEDDRHNKSIVPFHEASKEKDDRQ
NKSIVQFHEIVLPTLVAPSPVVMKTVRQRTPIPNHRKSKDPKKETSLAGTGVYIGLKEEE
DHQVNPADNEGLEDIWKEMSMAMECSKVVSADPLPDEEVERDYEEAERDEDCDHSFILKD
DIGYVCRVCGIIDRRIETIFEFQYKVKRSTRTYASDSRNTKKTDVFGVNVIKDDLIVTEI
PAHPRHMKQMKPHQVEGFNFLVRNLAGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPN
ARPLVVLPKGILSTWKKEFQIWQVEDIPLYDFYTVKADSRTQQLEVLNQWVEKKSILFLG
YKQFSSIVCDNGTNDTSLSCQKILLKVPTILILDEGHNPRNENTDMVQSLAKVETPRKVV
LSGTLYQNHVKEVFNILDLVRPKFLKMETSKTIERRIRSRVHVSGIKDFSDLVENTLQDT
DFKTKIAVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVMLTLSPRQKSEIAKIKKQSKR
KFKISSVGSAVYLHPKLKPLAENCGENSTSDRVIDDLVDKLDIRDGVKSKFYHNMLNLCE
SAGEKLLVFSQYLLPLKYLERLTINWKGWSLGREIFVISGESSYEHREWSMEKFNSSPEA
KVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPCQKKKVFVYRLVSADS
PEEEDHHVCFKKELISKMWFEWNEYCGDRAFEVEEVLLKECDDLFLESPLLGEDVKALYK
R
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctctgttgacgtgttatcagctaagcgctgtcgttcaaccggatctccctgt
ggccctgacacaggcaaaagacagaagttatcagatgtcgctgaccatacgaatccatct
gcaatttcggatgttgtggttcgtatagagcatgggaaatttggaagtgtcacaaaggaa
atagaggaccttgtagccatcaaaatgcaaatacttggaccttactttgcaaagtatccc
gtacttgttaatgaattcaggaatgtggtaactgaccacgatgaagacaccactaaattc
gaagatcaacaagacactggtttgacatatcatgatgtcatagatttggaggtggaaaac
tttgagaaggatgttcgtgcagctccagttcctgttattcacatcgattcagacggggaa
ggtgatgaagataaaaatgctattgttccttttcatgaagcctcagaggtggaagatgat
agacacaataaatctattgttccatttcatgaagcttcaaaagagaaagatgatagacaa
aataaatctattgttcagtttcatgaaattgtgttgccgacgcttgttgcaccgtctcct
gttgtgatgaagacagtcaggcagcgtactcccattcctaaccatcgcaaaagtaaagat
ccgaaaaaggagacaagtttggcgggtacaggtgtttatatcggtttaaaggaggaagag
gatcatcaggttaaccccgcagataatgagggcctagaagatatttggaaagagatgtca
atggcaatggagtgttccaaagttgtttccgcggatcctctgccagatgaagaagtagaa
agagactatgaagaagcagaaagagacgaggattgcgatcattcttttattttaaaagat
gatattggttatgtttgtcgggtttgtggaattattgaccgaagaattgaaaccatattt
gagtttcagtacaaggttaaacggagcacaagaacttatgcatctgattcacggaatacc
aagaaaacagatgtatttggagttaatgttattaaagatgacctcatagttaccgaaatc
ccagcgcaccctagacacatgaaacagatgaagccccatcaagttgaaggattcaatttt
cttgttagaaatcttgcaggtgacaatcctggtggctgcatcttagcccatgctccagga
tctgggaaaacattcatgataatcagtttcatgcaaagttttctaggcaagtatccgaat
gcaagacccttagtggtgcttcctaagggaatattgtcaacatggaaaaaggagtttcaa
atatggcaggtggaggacatacctttatatgacttctacacagtgaaggcagacagtaga
actcaacaactggaagtgctgaatcaatgggtggagaagaagagtattcttttcttggga
tacaaacagttctcctctattgtctgtgataatgggaccaacgatacatcattatcttgc
caaaaaattttactcaaagttcctacaattcttattttggacgagggacacaatcctagg
aatgaaaacacagatatggtacaatctctcgcaaaagttgagacgcctagaaaggttgta
ctgtcaggaaccctttatcaaaatcatgtcaaggaggtgtttaacattctagatcttgtt
cggccgaaatttttgaagatggaaacatccaaaactattgagaggcgcatccgaagtaga
gttcatgtatcagggataaaagacttctctgatttagttgaaaacactttgcaggacact
gattttaaaacgaaaatagctgttatacaagatttgcgtgagatgacgagcaaggtactt
cactattataaaggagattttcttgatgagcttcctggtcttgtggattttactgtaatg
ctcactcttagccctagacagaagtctgaaatagcaaaaataaaaaagcaatctaaaaga
aagttcaagatatcttctgtaggaagtgctgtctatctgcatcctaaactgaaaccacta
gcagaaaattgtggtgaaaattctacatctgatcgtgtaattgatgacttggtagataaa
ctggatatcagagatggtgtgaagtcaaaattttatcacaacatgctaaatctgtgtgaa
tcagcaggggagaagcttctagttttcagtcagtatctgttacccttgaaatatttagaa
aggttgactattaactggaaaggctggagtcttggaagagaaatttttgtaatctcagga
gaatcaagctatgagcaccgagaatggtccatggaaaaatttaacagttctcctgaagcc
aaagtcttctttggctcaatcaaggcatgtggtgaaggtatatcactggttggggcctct
cgcataattatcttggacgttcatctcaatccatcagttacacgtcaagctataggtcgt
gcattcagaccctgccagaagaagaaggtgtttgtgtatcgtttagtatcggctgattct
ccagaagaagaagatcaccatgtttgtttcaagaaagagttaatttcaaaaatgtggttt
gaatggaatgagtattgtggtgatcgagcttttgaagttgaggaagttcttctgaaagag
tgtgacgatctttttcttgagagtccattgcttggagaagatgtaaaagctctgtacaaa
aggtag
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