KEGG   Vigna unguiculata (cowpea): 114169313
Entry
114169313         CDS       T06017                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114169313
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vun03019]
    114169313
   03041 Spliceosome [BR:vun03041]
    114169313
Messenger RNA biogenesis [BR:vun03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     114169313
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114169313
Spliceosome [BR:vun03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    114169313
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 114169313
NCBI-ProteinID: XP_027910222
LinkDB
Position
11:11677692..11682393
AA seq 438 aa
MDPTKKRKLDENGFGDADPLKLSPTEARKLIERFTPEQLLDILQDAVARHADVLASVRAV
ADPDVSQRKLFVRGLGWDTTTDGLRSLFSTYGELEEAVVIIDKATGKSKGYGFVTFRHVD
GAVLALREPSKRIDGRVTVTQLAAAGNSASNANAADVGLRKIYVANVPPDLPADKLLAHF
SVYGEIEEGPLGFDKQTGKSKGFALFVYKTPEGAQAALLDPVKTVEGRQLSCKLAITDGK
QGKRAGPDSGQAHGNVQHGHGDGVGAGMGMPPAAGSGPGQYGGPQYGGPVGLGSYGGFGG
QPPLGNHNHPLNSSNPVPGSMAGAGGYGAGMGGPYGGYGGPGSAGFGAAGGLGGAGGGAG
VGGGLGGASGGLSGGAGSLYRLPGSGGMPAGGGGYPEGGHYGLSASAGYQNQHHPPSGAS
PVPRVPPGSMYPNVPPYY
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggatccgaccaagaagcgcaagcttgatgaaaatggtttcggtgatgccgacccgctt
aaactctctcccaccgaggcgcgaaaactcatcgagcgcttcaccccggagcagcttctc
gacatccttcaggacgcggtggctcgccacgccgacgttcttgcctccgtgcgtgccgtc
gcggaccccgatgtgtcgcagcgcaaactcttcgtgcggggcctcgggtgggacaccacc
acagatggcctccgctcactcttctccacctacggcgagcttgaggaggctgtcgtgatc
attgacaaggcaaccggcaagtccaagggctacggattcgtcaccttccgccacgtggac
ggtgccgtcctcgccctccgcgaacccagcaagcgcatcgacgggcgcgttactgtcacg
cagctcgctgcagcgggaaactccgcgtcgaatgccaacgcagccgatgttgggctcagg
aagatctacgtagccaacgtgccgccggaccttcccgcggacaagctcctcgcgcatttt
tctgtgtacggtgagatcgaagagggacccttagggtttgataaacaaactggaaaatca
aaggggtttgcgctttttgtttataagactcctgaaggggctcaagctgcgttattagat
cctgtcaagactgtggaaggaaggcaattgagttgtaaactggcgataacagatggtaag
cagggtaagcgagccggaccagattcgggtcaggcccatgggaatgttcagcacggtcat
ggggatggagtgggggctggaatggggatgcctcctgcggcggggtctgggcctgggcag
tatggcggcccgcaatatgggggaccggtcgggttgggttcgtatggtgggtttggtgga
cagcctccgttaggtaaccataatcatcctctgaattcatccaaccccgtacccggttct
atggccggtgctggtggttacggcgccgggatgggtgggccttatggtggatacggtggg
ccgggctctgcgggatttggtgctgcaggtgggttaggaggtgctggtggaggtgctggt
gttggtggtgggcttggaggagcaagtggtgggcttagtggtggtgctggttctttgtat
agattgccgggttctggcggcatgcctgcaggtggtggagggtatcccgagggtggtcat
tatggtttatcagcttcggctggataccagaaccagcatcaccctccttctggtgcttct
ccagtgcctagagttccacctggttcgatgtacccaaatgtgcctccttactactaa

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