Vigna unguiculata (cowpea): 114169682
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Entry
114169682 CDS
T06017
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03030
DNA replication
vun03410
Base excision repair
vun03420
Nucleotide excision repair
vun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114169682
03410 Base excision repair
114169682
03420 Nucleotide excision repair
114169682
03430 Mismatch repair
114169682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vun03032
]
114169682
03400 DNA repair and recombination proteins [BR:
vun03400
]
114169682
DNA replication proteins [BR:
vun03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114169682
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114169682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
RCF1-5-like_lid
Rad17
PTCB-BRCT
AAA_22
AAA_19
AAA_30
RuvB_N
nSTAND3
BRCT_2
Gp44_lid
Sigma54_activ_2
AAA_5
AAA_assoc_2
AAA_14
Zeta_toxin
AAA_17
AAA_33
RNA_helicase
AAA_16
TsaE
AAA_18
NTPase_1
AAA_24
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
114169682
NCBI-ProteinID:
XP_027910745
LinkDB
All DBs
Position
11:complement(32614853..32626944)
Genome browser
AA seq
945 aa
AA seq
DB search
MSDIRKWFMKSHDKGNNAAPSKPSNQSKPSSDKPQSDKNVAGGQESSGRRVTSKYFNTNK
QKVKDEKETQELPAKRKNVKDSEDIPQPKKIHEDVGDDSVLPTNKKKLAEATPTKKLKSE
SGRGIPQKPAVLEESDEDDKDAVSAVKSAGRGGGGRGAAGRSSGGRGRGGGRGGFMNFGE
RKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNY
LLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKAPSQAEKKPVNKAGAVASPSK
VSPKSQVKVPLSSRSPAKQAKPKAATTVQSSVMWTEKYRPKDPKDVIGNQSLIVQLRNWL
KAWHEQFLDTGNKKKGKKQNDSGLKKAVLLSGTPGIGKTTSAKLVCQELGFQAIEVNASD
SRGKADNKIEKGISGSKTNSVKELVTNESIGANMERSKLSKSVLIMDEVDGMSAGDRGGV
ADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVAKSEGLQ
VNEIALEELAERVNGDMRMAVNQLQYMSLSMSTINYDDIRQRFLTNAKDEDISPFTAVDK
LFGFNAGKLKMDERINLSMSDPDLVPLLIQENYINYRPSSTGKDDNGIKRMNLIARAAES
IADGDIVNVQIRRYRQWQLSQASCTATCIIPASLLHGQREILEQGERNFNRFGGWLGKNS
TMGKNYRLLDDLHVHILASRESSSGRDTIRMEYLTLILKRLTEPLRTLPKAEAVQQVVEF
MNTYSISQEDFDTIVELSKFKGQPNPLDGIQPAVKSALTKAYKEQSKSRVVRIADQITLP
GIKKAPKKRIAAILEPAEEGGEKGEDATLDESEEENTSDTEELEGGITKGEKLQSELQSL
NSKAMQVELELKGTGKSSSKKASGGRGKGASASGKKAAQAPKRKR
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatataaggaagtggttcatgaaatcacatgacaagggcaacaatgccgctccc
tccaagccttccaatcaatccaagccttcttcggataaaccccagtctgataaaaatgtg
gctggaggtcaagaaagctcagggaggagggtaactagcaaatattttaacacaaacaag
caaaaggtgaaagatgagaaagaaacgcaggagttacctgctaaaagaaagaatgtgaag
gacagtgaagatataccacagcctaagaaaattcatgaagatgttggagatgattctgtc
ttgcccaccaataaaaagaaattagctgaggccactccgacaaaaaaattgaagagtgaa
tcaggtaggggaattccccaaaaacctgcagttttggaagaaagtgacgaagatgacaaa
gatgctgtgtctgctgttaaatctgctggaaggggtggtggtggaaggggagcagctggg
cgatcaagtggtgggagaggtagaggaggtggtagaggtggattcatgaattttggagaa
agaaaagatcccccacacaaaggagaaaaggaagtccctgaaggtgctcctaactgttta
gctggcttgacttttgtgattagtggaacactggacagtttggaacgtgaagaagctgaa
gatttgattaaacgccatggtggtcgagtcaccggatcagtcagcaagaaaacgaattat
ttgctatgcgatgaagacattggggggcggaagtctgaaaaggccaaagagctagggact
tcctttctcacggaggatggattgtttgatatgattcgtgcatcaaaacctgcaaaagct
ccttcacaggcagaaaagaaacctgtgaataaggctggtgcagtagcatccccgtcaaaa
gtttctccaaaatcgcaagtaaaggtccctctgtcttcacgctcacctgctaagcaagct
aagccaaaggctgctactactgttcaatcttctgtgatgtggacagagaaatatcgacct
aaagatccaaaggatgtcatagggaaccagtcacttattgttcaactacgtaactggttg
aaagcttggcatgaacaatttttggacactggtaacaaaaaaaagggtaaaaagcaaaat
gactctggtttgaaaaaagctgtcttgttaagtggaacccctggtatagggaaaacaact
tcagcaaagttggtctgtcaggagcttggtttccaagccatagaggttaatgctagtgat
agccgtggaaaagctgataacaaaattgagaaaggaattagtggaagcaagacaaattct
gttaaggagcttgtaaccaatgagtctattggtgctaatatggaacggtccaagctttcc
aaatctgtgctcattatggatgaggttgatgggatgtcagctggtgataggggtggtgtt
gctgatcttattgcttccatcaagatatcgaaaattcctattatctgcatttgcaatgac
cgttacagccagaaacttaaaagccttgtgaactactgtttgcttctaagttttcggaag
cctacaaagcagcagatggcgaagaggttgatggatgttgcaaagtctgaagggcttcaa
gtcaatgagattgctcttgaggaactggcagaaagagttaatggagatatgcggatggca
gtaaatcagttacagtatatgagcctctctatgtcaactatcaattatgatgacattaga
caacgctttcttaccaatgcaaaggatgaagacatttcaccattcacggctgttgataag
ctttttggttttaatgctgggaagttgaaaatggatgagaggataaatcttagcatgagt
gatcctgatcttgttcctcttcttattcaggaaaattatattaattatagaccaagctcg
actggtaaggatgacaatgggataaaacgcatgaacctgattgcccgtgctgctgaatct
attgctgatggggatatagtgaatgttcagattcgcagatatcgacagtggcagctctct
caagctagttgtacagcaacatgcataattcctgcatcattgttgcatgggcaaagagaa
atacttgaacagggagaacgcaatttcaaccggtttggtgggtggcttgggaaaaactcg
acaatgggcaaaaactataggcttttggacgatcttcatgttcatattcttgcttctcgt
gaatctagctcaggaagggataccattcgcatggaataccttactcttattcttaaacga
ttgactgaacccctacgaaccctgcctaaggctgaagcggttcaacaagttgtggaattc
atgaatacgtactctatcagtcaggaagattttgatactatagtagagttatcaaaattc
aagggtcagcctaatccactagatggcatacagcctgccgttaagtcagctttgacaaaa
gcctacaaagagcaaagcaaatctcgggtggttcgaattgccgaccaaatcacacttcct
ggtataaagaaggcccctaagaagcggattgctgctatacttgaaccagccgaggaagga
ggcgaaaagggtgaagatgccaccttggacgagagtgaagaagagaacacctctgataca
gaagagttggaaggcggcatcaccaagggtgagaagctgcaatcagaacttcaaagcttg
aattcaaaagccatgcaagtagagttggaactgaagggaacgggtaaatcgagttccaag
aaggcatcaggtggtagaggtaaaggtgcttctgcatctgggaagaaggctgctcaagct
ccaaaaagaaaaaggtga
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