Vigna unguiculata (cowpea): 114169813
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Entry
114169813 CDS
T06017
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114169813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114169813
Enzymes [BR:
vun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114169813
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
114169813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF5689
Motif
Other DBs
NCBI-GeneID:
114169813
NCBI-ProteinID:
XP_027910931
LinkDB
All DBs
Position
11:1728987..1748041
Genome browser
AA seq
1175 aa
AA seq
DB search
MVVKPGSVPDFEALRELFKHHIESFDHMVDAGLDTAIRHIKAVEVFDELTATKLRISLEN
PVMYPPQKERISRTMKEALLPFECRQAKISYTGKLTIDVCFQYNDGPVIRETLNFGQFPI
MLQSKLCNLRGADPKKLVSYKEEASEMGGYFVLNGLERVIRLLIMPKRNYPTSMVRNSFS
ERREGYTDKAVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVGIVLKALIKT
SDREIYVKLTSCYNEKYAKGKGVVGTQLVGERAKIILDELRDLSLFTQDQCLEYIGEHFQ
PIMPELKQASYSIVAEAVLKDCILVHLDENFDKFNLLIFMLQKLFSLIDQTSVPDNPDSL
QNHEVLLPGHLITLYIKEKLEDWLQKGRRLIMDEIDKKSQKFDISDIAQVKKIMDKNSSK
QVSAAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFISHFRSVHRGASFAGLRTT
TVRKLLPESWGFLCPVHTPDGEPCGLLNHLTRTCRITSFFDSQGKIKDYFKIKKSIEDIL
KEVGMTPSVPNTPLPGPPEALTVLLDGCVIGCIASSEVEKVVAYIRELKVSSASVIPDDM
EVGYVPLSMGGAYPGLYLSTSPSRFVRPVKNISIPSNGNENIELIGPFEQVFMEIRCLDG
GDGGRKSSFPATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQH
RADQKLYHLQTPQTPIVRTSTYSKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVE
RGMFHGQIYQTETIDLTEQSRKSDQSSRMFRKSNVEKSAHPSIDSDGLPHVGQMIRPDEP
YCSIYNEVTSSTHTFKRKGSEAVYVDYVAVDVKNSKQLQKVNIRFRHPRNPVIGDKFSSR
HGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFV
DATPFRSSVKKDDEGSDSKSGSLVDDLGLILKEKGFNYHGLEVLYSGVYGTELTCEIFIG
PVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLH
DRLHTCSDYHIADVCSLCGSMLTTTFIEPQKRPVRQIGGLPPGRTAKKVTCHACQTSRGM
ETVAMPYVFRYLAAELAAMNIKMTLKLTDGAEVGA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggtggttaaaccaggttcggtaccggatttcgaggcgctcagagagctgtttaagcat
catatagagtccttcgatcacatggtagacgctggattggacaccgctatccgccacatc
aaagccgtcgaggttttcgacgagttaactgccacaaagcttagaatttcgttggagaat
ccagttatgtatccaccgcagaaggagcgaatttcgaggacgatgaaggaagctttactt
ccgtttgaatgtagacaggcaaagatttcttatacaggaaagctaactatagatgtttgc
tttcaatacaatgatggacctgttattagagaaactttaaattttggacagtttcccata
atgttgcagtcaaagttatgcaacttaagaggtgctgaccccaaaaaacttgtgtcctac
aaggaagaagcatcggaaatgggtggctacttcgtcttgaatggccttgagagggttatc
cgactgttaattatgccaaaacggaattatccaacgagtatggtgcgaaattcatttagt
gaaaggcgagaaggatacactgataaagcagttgtaataaggtgtgtaagagctgatcag
tcctcattatcaatacgattgtattaccttcgtaatgggagtgcaagacttggtttctgg
ttaagaggaagagaatacttacttcctgttggcattgttttgaaggccctcattaagaca
tctgatcgtgaaatttatgtaaaattgacaagttgctataatgaaaagtatgcaaaggga
aagggtgttgttgggacccagcttgttggtgaaagggcaaaaataatcttagatgaactt
cgagatttgtctctattcacccaagatcaatgtctagagtatattggagagcacttccaa
cctattatgcctgaacttaagcaagccagttattctattgtggctgaagctgttttgaag
gactgcatattagttcatctggatgagaatttcgacaaattcaatcttctcatcttcatg
ttgcagaaacttttctcgcttatagaccagacgtcagttccagacaatcccgattccttg
caaaatcacgaggttttactccctggccatctgattacactttatatcaaggaaaaattg
gaagattggctgcaaaaaggaagaaggcttattatggatgaaatcgataaaaagagccag
aaatttgatatcagcgacattgctcaagttaagaaaattatggataaaaattcgtcaaag
caagtcagtgccgctgttgaaaacatgttgaaaactggaagattggttacacaaacgggt
ctagatctgcaacagagggcaggatatacagttcaggctgaaaggctaaactttttacgt
tttatatcacattttcgttccgttcatagaggggcctcatttgctggactccgtaccaca
actgtccggaagctcttacctgaatcttggggatttctttgccctgtgcacacacctgat
ggagagccttgtggattgttgaatcatttgactcgcacttgtaggataacatcattcttt
gattctcaaggaaaaattaaagattattttaaaataaaaaagtccattgaagatatttta
aaggaggttgggatgacaccatccgtgccaaacacacctcttcctggtccacctgaagct
cttactgttctcttagatggttgtgtcattggttgtatagcatccagtgaagtggagaaa
gttgtggcttacatacgagaattaaaagtctcttctgcttcagtgattcctgatgacatg
gaagtgggatatgttcctttgagcatgggtggagcctatcctggtctttacctttccacg
tccccttcaagatttgttcgaccagtaaaaaatatatcaattccttccaatggaaatgaa
aacattgagctcattgggccatttgagcaggtttttatggaaattagatgtcttgatgga
ggagatggtggaagaaaaagttcatttcctgcgactcatgaagaaatccacccaacagaa
atgcttagtgtagttgcaaatctcaccccgtggtcagatcataatcagagtccacgaaat
atgtaccaatgccagatggcaaagcaaacaatggcattctcttcacaaactattcaacat
cgtgcagatcagaagttgtatcatcttcagactcctcagactcccattgtacgcacaagt
acatatagtaagtacaacattgatgaatttccgacaggcacaaatgctattgtggcagtt
ctggcttatacaggatatgatatggaggatgccatgattctaaataagtcttcagtggaa
cgtggaatgtttcatggacaaatatatcagacggaaactattgacttaactgaacaaagc
agaaagtcagaccaatcttcgagaatgttcagaaaaagtaatgtagagaaatcagctcat
ccctctattgattcagatggacttccacatgttggtcagatgatacgaccagatgaaccc
tattgtagcatttataatgaagttacaagttccacacacacatttaaaagaaagggttct
gaagctgtttatgttgattatgttgctgtggatgtcaaaaactcgaagcagcttcagaag
gttaacatacgctttcgacatcctcggaaccctgttattggggataaatttagcagtaga
catggacagaaaggtgtttgctctcagttgtggccagatgttgatatgccattttctgga
aatactggcatgcgccctgatctcatcatcaatccccatgcatttccttccaggatgaca
attgctatgcttttggaatcagttgctgctaagggaggttccttacgtggagaatttgta
gatgcaactccatttcgaagttcagtgaagaaagacgatgaggggtctgattcaaaatct
ggttcccttgtggatgatcttggtcttatactaaaagaaaagggatttaattatcacggt
ctggaggttctatacagtggtgtttatggaacagagctaacatgtgaaatatttattggg
cctgtttattatcagcggctgcgacacatggtttcagacaaatttcaggttcgatctact
ggcacaattgatcaggttacccggcagccaataaaaggacggaagcgtggtggaggaatt
cgattcggcgaaatggaacgtgactctctgcttgcacacggagctgcatatcttctgcat
gataggttgcacacatgttctgattatcacattgctgatgtatgttctctatgtggaagc
atgctgacaacaacattcatcgagccgcagaagaggccggtgcgccagatcggtgggcta
ccccccggaagaaccgcgaagaaggttacctgtcatgcttgccaaacgagtagaggcatg
gagactgttgccatgccttatgtgttcagatatttggctgcagagttagcagcaatgaac
attaaaatgactctcaagctcactgatggagctgaagttggagcctaa
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integrated database retrieval system
