Vigna unguiculata (cowpea): 114169997
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Entry
114169997 CDS
T06017
Name
(RefSeq) protein SMG9-like
KO
K18735
protein SMG9
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114169997
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114169997
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
AAA_18
RsgA_GTPase
MeaB
AAA_16
AAA_22
Dynamin_N
DO-GTPase2
FeoB_N
AAA_30
Motif
Other DBs
NCBI-GeneID:
114169997
NCBI-ProteinID:
XP_027911253
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Position
2:complement(32739208..32742604)
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AA seq
396 aa
AA seq
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MAGSEPFPSPKILLAKPGIVTGAPVSGKFGRGGAGDDDSVQLRSRLPSVASLNLLSDSWD
FHIDRFLPFLTENTDFTVIGVIGPPGVGKSTIMNELYGFDSSSPGMLPPFAIQSEETRAM
ARHCSTGVEPRISTERIILLDTQPVFSASVLAEMMRPDGSSTISVLGGETMPAELAHELM
GIQLAVLLASICHIVLVVSEGVRDDSMWQLMLTVDLLKHGISDPSLMASSLSQSSSSGLE
KDRHLEHEEYVATPVFVHTKLQDQDFTPNNFVQLKKALMQYFRPTSFVRQHIGNKPEEHA
LSSTVRGSQMKSNLIKLYAIPLKKKDENPRAQHESYVSALWKLRDQILSMKSPSFTRPVS
EREWLKNSAKIWEQVKNSPTVLEYCRTLQHSGMYRR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttctgaaccttttccttctccaaaaattcttctagcaaagccgggaatcgtc
accggagctcccgtctccggtaaatttggccgtggaggcgccggcgatgacgattccgtt
cagctccgttctcgtctcccttccgtcgcgtccctcaaccttctctccgattcctgggat
ttccacatcgatcgctttctcccattcttgactgagaatacggacttcactgtaattgga
gtgattgggccacctggggtgggcaagtccactattatgaatgaactttatggttttgat
tcaagttcccctgggatgctaccaccttttgccatacagtctgaagaaactagagctatg
gcaaggcattgctccacgggcgttgaaccaaggatttcaactgaacgcattattcttctc
gatacccagcctgtatttagtgcttctgttttagctgagatgatgagaccagatggctct
tcaacaatttcagtgctaggtggagaaaccatgccggctgaattggctcatgaacttatg
ggtattcagcttgctgttcttctagcatccatatgtcatattgtgctggtggtgtcagag
ggagttcgtgatgatagcatgtggcaattgatgttgacggttgatttgttgaagcacggc
atttcagacccgtccttgatggcatcatccctatcgcaaagctctagttcagggcttgag
aaagatagacatcttgaacatgaagaatacgtggccactcctgtgtttgtacacacgaag
ttgcaggatcaagactttactcctaataattttgtgcagttgaaaaaggcactcatgcaa
tatttcagaccaacttcttttgtgagacaacacattggaaacaaacctgaagagcatgct
ttatcttctacagttcgtggcagtcaaatgaaatctaacttaataaagttatatgcgatc
cctctaaagaagaaagatgaaaatccaagagctcaacatgaaagttacgtttctgcacta
tggaaattgcgtgatcagattttatccatgaagtcaccatctttcacgagaccagtctca
gagcgggaatggttaaagaactctgccaagatatgggaacaggttaaaaactccccaacc
gtattagagtattgtagaacacttcaacattcgggtatgtataggagataa
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