KEGG   Vigna unguiculata (cowpea): 114170000
Entry
114170000         CDS       T06017                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114170000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vun03021]
    114170000
Enzymes [BR:vun01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     114170000
Transcription machinery [BR:vun03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     114170000
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3
Other DBs
NCBI-GeneID: 114170000
NCBI-ProteinID: XP_027911252
LinkDB
Position
11:1206604..1226161
AA seq 2052 aa
MEDSPPSSLLDGVVIGVKFGMATRQEISTASISDSSISHASQLSNPFLGLPLEFGRCESC
GTSEAGKCEGHFGYIELPIPIYHPSHITELKRMLSLVCLNCLKMRKSKPSASGSGLVQRL
VSPCCEFNATEVSIRDVKTSDGACYLTLKVSKSKMQPDFWGFLEKYGYRYEGDHTRALLP
CEAMEIIKRIPIETKRKLAGKGYFPQDGYVLKYLPVPPNCLSVPEVSDGVSVMSSDPSIT
ILRKLLRKVEIIKSSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSKAARAIETRFGVNK
ELNESSTQAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRVTFEERVNI
HNIGYLQKLVDENLCLTYKEGMSTFSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPT
THKHSLQALFVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVVELFSVEN
QLLSSHSGNLNLQLSSDSLLSLKMLVKRCFFDRVAANQLAMFLVPLPQAGLMKANSGDSY
WTSIQILQCALPLCFDCSGGRYLIRQSEILEFDFNRDALPATVNEIAASIFFSKGPKEAL
KFFDVLQPFLMESIFADGFSVSLQDFSISRAIKRIIGRSIGKVSSLLYQLRSVYNELVAQ
QLDKLIRDIELPVINFSLKSTKLGDLIDSKSKSAIDKVVQQIGFLGQQLFDRGRFYSRGL
VEDLTSHFHVKCCYDGDGYPSAEYGLLKGSFFNGLDPYEEMVHSISTREIMVRSSRGLSE
PGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGLEKTEHLFPAGEPVGVLAATAMS
NPAYKAVLDASPSSNSSWELMKEILQCKVNFKNEPGDRRVILYLNDCDCGGNYCRENAAY
KVKDQLRKVNLKDVAVEFIIEYQEQRMRKGNSETDAGLVGHIYLDEMMLEELKISMANIF
QKCSDRLKSFSRRKKANEFLNRTELSFSESCLSSHPAAPCLTFIWLDDRSNEFDRIVKTL
SEEICPVLLDTIIQGDPRISSASIIWVCPDTNTWVRNPYKSSNGELALDIILEKEVVKQS
GDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGIACTFDQAIQRVAASVKMVAKGVL
REHLILLASSMTCGGNLVGFNTGGYKALCRQLNIQVPFTDATLFTPKRCFERAAEKCHTD
SLSSIVASCSWGKPVAVGTGSKFDVVWDANKIRSSEIEGMDVYSFLHMVKGHTDGEEEAD
ACLGEDIDDLLEEEKMDLEMSPPHNSGFEAVFEDNPEVLNDSTSNGWAVHSNQTESKTNG
WSGWVSNKAGTNEGRSENAQVSSWGNTVTQEDSSKSSGWNSNTTDHTNTKSNEWSAWGSK
KSEIQTGGSENVQGSWGMGKTKDDTQKDNSGSGAWGANKTVQANTKSNEWSGWGNNNSEI
PAGGSKNMQGSWGSGKRKEVTQEDNFASGAWDANRTDHTKTKSNEWSDWGRNNKSEILAG
GSQENSWGSSKLKDDVAHKNNPGSSAWDAGSTNHTKAKSNEWSGWGKNRSEIPAGGSENL
QDSWGSDKGKDDVTQVDNSVHGSWGGNRSDQTKAKSNEWSGWGMNKSEMQPGGSENVIED
SWGSGKSKDDVTKNDNSESGAWGASSTGQMKSKSNEWSSWGKNKSERPAAESENVHNNSW
GSGKRKDVTQVDNSVSGSWGGSRGDQINTKSNEWSGWERNKSAIPASGTDNAQGGSWGSS
ILKDDVTQKDNSGSGSWGANKSGFAKTEVDEWARNKVEAIDGGSEKPQEDSWNSGNWKAD
SKVGNTSWGKAKSSGSQSWDSHNQSNQNSTSRGWESHIASANSDTEKGFQWGKQGRESFK
KNRFEGSQGRGSNSGDWKNRNRPPRAPGQRFDLYSSEEQDVLKEIEPIMQSVRRIMQQQG
YNDGDPLAAEDQQFVLENVFEHHPDKETKMGAGIDYVMVNRHSSFQDSRCFYVVLKDGQR
EDFSYLKCLGNWIRKKYPDLAEAFLGKYFRKPRRRQDQTANPRGDQTAMPVQDEASTPAD
QTSTPGPVETNE
NT seq 6159 nt   +upstreamnt  +downstreamnt
atggaagatagtcctccctcaagtcttttagatggggtggttattggagtcaaatttggt
atggctacacgccaggaaattagtacagcatcgatcagtgactcttcaattagtcatgct
agtcagctgtcaaatcccttccttggtctaccccttgaatttggcagatgtgaatcttgt
ggtacttctgaagcaggaaaatgtgaaggtcactttggatatattgagctaccaattcca
atttatcatcctagtcatattactgagttgaaacggatgctgagccttgtctgtttaaac
tgcttgaaaatgcggaaaagcaagccttcagcatcaggcagtggtttggtgcagagatta
gtatctccttgttgtgagtttaatgctactgaagtttctataagggatgttaaaacaagt
gatggggcttgttatctgacactcaaggtatccaaatccaagatgcagcctgatttttgg
ggttttttagaaaaatatggctatcgctatgagggtgatcatactcgagccttacttcct
tgtgaggcaatggaaattattaagagaatcccaatagaaaccaaaagaaagcttgctgga
aaagggtattttcctcaagatggatatgttttgaagtatcttccagtgccacctaattgc
ttgtcagtaccagaagtttcagatggcgttagtgtcatgtcttcggatccttccattaca
attctgagaaaattgctcaggaaggttgaaatcatcaaaagttctagatctggagaacca
aattttgagtctcatcacgtggaagcaaatgatttgcagtcagttgttgatcagtatttt
caaattaggggcacttctaaggcagcacgtgctatagaaacacgttttggggtcaataaa
gagcttaatgaatcgtcaacgcaagcatggctagagaaaatgcggactttatttataaga
aaaggttcaggtttttcctcccggaatgtgataactggagattgttataaaaggataaat
gaagtaggaattccggttgaagttgcccaacgagtaacatttgaggagagagttaacatc
cataacataggttatttgcagaaattagttgatgaaaatctgtgccttacttacaaggag
ggcatgtcaactttttcactcagggagggctcaaagggtcacatatatctgaagcctggt
cagatagtacatcggaggattatggatggggatatcgtcttcattaacaggccacctaca
acacacaaacactctttacaggcactttttgtttatatccatgatgaccacactgtgaaa
ataaatcctttaatttgtggaccacttggggctgattttgatggtgactgtgtccatctg
ttttatccacagtcacttgctgccaaagcagaagttgtggagttattttctgtcgagaat
caactgctcagctctcacagtggcaatttgaatttacaattaagctcagattcgttgttg
tcgctgaagatgttggtcaagagatgtttttttgatagagtggcagctaatcaattggct
atgtttcttgtacctttgcctcaagctggtttgatgaaggccaattctggtgattcttat
tggacttccatccaaattttacagtgtgctcttcctctgtgttttgattgctctgggggg
cggtatttgattaggcagagtgaaatcttagaatttgattttaatagggatgctttgcct
gcaacagtaaatgaaatagcagcctcaattttctttagcaagggtccaaaggaggcacta
aagttctttgatgtattgcagccttttttgatggaaagtatatttgctgatgggtttagt
gttagcctgcaagatttttcaatatccagggcaattaaaagaattataggcagaagcata
ggaaaagtttcttctctgttgtatcagctgaggtctgtttacaatgaactggtggcgcaa
caattggataagcttattcgtgatattgaacttcctgttattaatttttctctaaagtca
accaaactaggagatttaattgattcaaagagtaaatctgcaattgataaggttgttcaa
caaattggtttcttagggcagcaactttttgataggggaagattctattcaagaggattg
gtggaagatctaacatctcattttcacgtgaagtgttgctatgatggggatggctatccc
tctgctgagtatggattgctcaaagggtcttttttcaatggtttggatccatatgaagag
atggtgcattcaatttcaacaagggaaataatggtgcgttcttcaaggggattatctgaa
ccaggaacactattcaagaatttgatggccattcttcgggatgttgttatctgttatgat
ggaactgttagaaatatttgcagtaattccattatccagtttgaatatggattagagaaa
actgagcacctattccctgctggtgagcctgtaggtgtcttagctgcaactgccatgtca
aatcctgcttacaaggctgtccttgatgctagtcccagtagcaattcctcatgggagttg
atgaaggaaatattacaatgcaaggtcaattttaagaatgaacctggtgatcggcgtgtt
attttgtacttgaatgactgtgattgtggagggaattattgtcgggaaaatgcagcatat
aaagttaaagatcaattgagaaaagtcaatcttaaggatgtagcagtggagttcattatt
gagtaccaagaacagcggatgcgaaagggaaattctgaaactgatgctggacttgttggt
catatttatctggacgagatgatgttagaagagctgaagatcagcatggccaacattttt
cagaaatgctcggatagactaaaatcatttagtcggagaaagaaagctaatgaatttctg
aataggactgaattatcgtttagtgagtcttgcttatcttcacatcctgctgccccgtgt
ttaacattcatttggcttgacgatcgtagtaatgaatttgatcgcattgtaaagacccta
tcggaagaaatctgccctgttctgttagatacaataatccaaggagacccacgcattagc
tctgcaagtataatttgggtttgtccggatacaaacacatgggtcagaaacccttataaa
tcttccaatggtgaactggcactggatattattcttgagaaggaagtagtcaagcaaagt
ggtgatgcttggaggattgtacttgattcctgccttcctgttcttcatttgattgatacc
aggcgttcaatcccatacgctattaagcagattcaagaattactggggatagcatgcact
tttgatcaggcgattcagcgtgttgcggcatctgtgaaaatggtggcgaaaggtgttctt
agagagcatctaattttgttagctagtagtatgacatgtggagggaacctggttggcttt
aatacagggggatataaagccctctgtcgacaactaaatattcaagtaccattcacagat
gcaacactctttacacctaaaagatgttttgagcgagctgctgagaaatgtcatactgac
tctctgtcaagcatagtggcatcttgttcctggggtaagcctgtggcagttggtacagga
tcaaaatttgatgttgtttgggatgcaaataagataagatcaagtgaaattgaagggatg
gatgtttacagttttcttcacatggttaaaggtcatactgatggggaagaagaagctgat
gcttgtttgggtgaagatattgatgatttgctggaagaagaaaaaatggatttggaaatg
tccccaccacataactctggttttgaggctgtctttgaagacaatcctgaagtactgaat
gattcaacgtccaatggttgggctgtacattcaaatcagactgaatcaaaaaccaatggt
tggtctggttgggtaagtaacaaagctggaacaaatgaaggaagatctgaaaatgcccag
gtgagttcttgggggaacactgtcacacaagaagactcttctaagtcaagtggttggaat
tcaaacaccacagaccacactaataccaaatctaatgaatggtctgcctggggaagtaag
aagtctgaaattcaaacaggtggatctgagaatgttcaaggttcatggggcatgggtaaa
acgaaagatgatacccaaaaagataattctgggtctggtgcttggggtgcaaacaaaact
gttcaggcaaacacaaaatctaatgaatggtctggctggggaaacaataattctgaaata
ccagccggaggatctaaaaatatgcaaggctcttggggctctggtaagagaaaagaagtt
acccaagaagacaattttgcatctggcgcttgggatgcaaacagaacagatcacactaaa
acaaaatctaatgagtggtctgactggggaagaaataataagtctgaaatacttgctggt
ggatctcaagaaaattcctggggctcaagtaaattgaaagatgatgttgcacacaagaac
aatcctggttctagtgcttgggatgcaggaagcacaaatcatacaaaagcaaaatctaat
gagtggtctggatggggaaagaataggtctgaaataccagctggtggttcagaaaatctg
caagattcttggggctctgacaaggggaaagatgatgttacccaagtagacaactccgta
catggttcttggggtggaaacagaagtgatcagacaaaagcaaaatctaatgaatggtct
ggctggggaatgaataaatcagaaatgcaacctggaggatctgaaaatgtaatagaagat
tcttggggctcaggtaaatcgaaagacgatgttaccaaaaatgacaattctgagtctggt
gcctggggtgcaagcagcacaggccagatgaaatcaaaatctaatgaatggtctagctgg
gggaagaataagtctgaaagaccagctgctgaatctgaaaatgtgcataataattcttgg
ggctctggtaagaggaaagatgttacccaagtagacaactctgtgtctggttcttggggt
ggaagcagaggagatcaaattaacacaaaatctaatgaatggtctggctgggaaaggaat
aaatcggcaataccagctagcggaactgacaacgcacaaggaggttcttggggctcaagt
atattgaaagatgatgttacccagaaagataattccggttctggttcttggggtgcaaac
aaatcaggttttgcaaaaactgaagtagatgagtgggcaagaaataaagttgaggcaata
gatggtgggtcagaaaagccccaagaagattcttggaactcaggtaattggaaagctgac
tcaaaagttggcaatacctcttggggaaaagccaaatcctctggaagtcaatcatgggat
tcccataatcagtcaaatcagaattcaacttcacggggatgggaatcacatattgcttca
gctaattcagacactgagaaaggttttcagtggggtaagcaaggtagagaatcttttaag
aagaatcgctttgaaggttcacaaggtcggggttcaaatagtggtgactggaaaaatagg
aatcgcccacctagagcacctggacagagatttgacttgtattcatctgaggagcaggat
gtgctgaaggagatcgaacctattatgcagtctgtcagacgaatcatgcaacaacagggg
tacaacgatggggacccgctggctgctgaagatcaacaatttgtacttgagaatgtcttt
gagcaccacccagataaagaaaccaaaatgggtgctggaattgattatgtcatggttaac
agacacagcagttttcaggatagcagatgcttttatgtggttttgaaagatggtcaaaga
gaagatttttcctacctgaaatgcttgggtaactggataagaaagaagtatccagacctt
gcggaagcattcctaggtaaatattttcggaaaccccgtcgtaggcaggaccaaactgca
aacccaaggggggaccagactgcaatgccagtgcaggacgaagcttctacaccggctgac
cagacctcaacacccggccctgtggaaacgaatgagtag

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