Vigna unguiculata (cowpea): 114170154
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Entry
114170154 CDS
T06017
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vun03400
]
114170154
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
114170154
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
114170154
NCBI-ProteinID:
XP_027911439
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Position
2:complement(31003038..31008291)
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AA seq
1108 aa
AA seq
DB search
MAEKAAAPPPPSKPLTSQEWETLIEDFQNGVHHKWNSLDPLFDLLLSSLLRKDFPLFLKL
QLLVFLDEFSLSFLTSHHHLHRLVEALKAVVHAPLDVAASTFKDQFMVSATSILICTSEN
VAVEAQTETNLVELLLTVVNRPNFGSDRQTRGVACECLRELERWKPGLLSDVVGHLWSLC
QSERTHASQCYLLLFASVIHSIVARKLSVSILNTSVPMIPFYAPNCVTDSGSGSGSESSS
GLNVKELRRALSFLLEWTLVMTPFGMMEFLSMIIPVAVALELQPSMLKVQVFGMIHSFDP
VLCHVVLSMYLRFLEAFEGQEGEVSRRLLLISRESQHFLVFRLLAIHWLLGFNQLIFEKT
KPTIELCSTFYPALFDPLALKALKLDLLAFSSVCAHVLRLKSGSDELIDPVKLFENGLVC
VSSFKWLPPTSTETAVAFRTFHKFLIASSSHSDNDPSTARNLLDSAIFRTLQGLLVNMML
ESRRLVPVVVAFVDRLLSCQKHSWLGECLLQKFDEHLLPKVRMDYKLVYCFPIFDRIAEN
QTIPPRGLLELLTNFMIFLVEKHGPDTGMKSWSQGSRALGICRTMLMRHHSSRLFLRLSR
LLAFTCLYFPDLEVRDNSRIYLRMLVCIPGKKLRDILNFGDMIVGISPSSHPTSFFNVQS
PRPSQKFKSFKNLSSCIHLERLRPLLVKQFWSLSLSNLVVSNANPTYLESIRDFKAPVEE
KEFSDSSNTQIIPETLRINQPQEPLRVMDSKVAEILNTLRKYFSCIPDFRYMPGLKVRIS
CSLRFESDTFNRMLGIDKTVPSLEEIDTLPAIYATVLNFSSSAPYGSIPSCRIPFLLGEP
YNKDPASQNVSLSIVPVGVNDSREEEKLKATVVVDLEPREPTPGIVDVHIETNAENGQII
HGQLQGITVGIEDMFLKAIVPSDIPEDETPRYNFNLFNTLWEACGSSSSTGRETFQLKGG
KGIAAIGGTQSVKLLDVPAASLIQATERHLACFVVGVSGEPLIDAVWEGGIIQNVIWEDA
SPDATSVSHHDTGPLRLTYNDEEYEKGAISNTRKRNLGCFHVLIFLPPRFHLLFQMEVGD
VSTLVRIRTDHWPSLAYIDDYLEALYLS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaagcggcggcgccaccaccaccgtcgaagcctctgacatctcaggagtgg
gaaaccctaatcgaggacttccagaatggcgtccaccacaaatggaactctctggatcct
ctcttcgatcttctcctctcctctcttctccgcaaggacttccctctctttctcaagctc
caactccttgtcttcctcgacgaattctccctctccttcctcacctctcaccaccatctc
catcgcctcgtcgaagcgctcaaagctgttgtccatgcgccgctcgacgttgccgcttcc
accttcaaagaccagttcatggtctctgccacctcgattctcatctgcacatcagaaaac
gttgccgtcgaggcccaaacggagactaacctggttgagctgctgctgacagttgtaaac
cggcctaatttcggttcggaccggcaaacgcgcggcgtggcgtgcgaatgcctgagggaa
ttggagcgatggaaaccgggattgctctccgatgtggttggacacttgtggagtttgtgc
cagagcgaacgtactcacgcttcgcagtgttacctcttgctcttcgcatctgtgattcac
agcatcgtcgctcggaaactcagcgtttcgattctcaacacatcggttccgatgatccct
ttctacgcgcctaactgtgtgacggattcgggctcgggttcaggctcggagtcaagttcg
ggattgaatgtgaaggagttgaggagggcgttgtcatttttgctggagtggacgctagtg
atgactcctttcgggatgatggagtttttgtctatgataattcccgtggctgtggcattg
gaattgcaaccttccatgctgaaggtgcaggtgttcgggatgattcattcctttgaccct
gttctgtgccatgttgttttgagcatgtatttgcgtttcttggaggcatttgaaggtcaa
gagggagaggtttctcgcaggctcttgttgatttcgagagaatctcaacattttttggtg
tttcgcttgttggctatccactggttgttgggtttcaatcagttgattttcgagaagacg
aagcccaccatcgaattgtgctccactttttatcccgctttgtttgatcctctggctttg
aaagccttgaagcttgaccttcttgcgttttcatctgtttgtgctcatgtattgaggctg
aaaagtggttctgatgagttgattgatccagtgaagctgtttgaaaatggtcttgtttgt
gtatcttctttcaaatggctgcctcccacgagcaccgagactgctgttgcatttcgcacc
ttccacaagtttctgattgcttcttcttctcattctgacaatgatccttccaccgcaaga
aatctgttggactctgccatttttcgcactttgcagggattgcttgtgaacatgatgttg
gaaagtagaaggctggttcctgttgtcgtagcctttgttgatcggttactctcctgtcaa
aagcattcttggttgggtgagtgcttacttcagaaatttgatgagcacttgcttcccaaa
gtgagaatggattataagttggtttattgcttcccaatatttgatagaattgctgaaaat
cagactatacctcctcgtggattgttagagctgctcacgaacttcatgattttccttgtg
gagaaacatggcccagatacggggatgaaatcgtggtcccagggaagcagagctcttgga
atttgccgaactatgcttatgcgccaccatagctctagattgttccttagattgtctcgg
ctgcttgcatttacatgtctatatttccctgatctggaggtccgtgataattcaaggatt
tacttgcgtatgctggtctgcattccagggaagaagcttagagacatcctgaacttcggg
gacatgatcgttggaatttcgccatcatcacatccaacctcattttttaacgttcagtct
cctcgaccttctcagaaattcaagtcatttaaaaacttatcatcctgcattcaccttgag
cgtttgcgcccattgctagtcaaacaattttggtctctgtcgttgtcaaatttagttgtt
agtaacgccaatcctacttatctggagagcatcagagatttcaaagctcctgttgaggaa
aaggaattttctgacagttccaatacacagatcattcctgaaacgttaaggataaatcag
ccacaagaaccactccgtgttatggattctaaagttgcagaaattttaaatacattaagg
aagtacttttcctgcattcccgacttcagatatatgccaggtctcaaagtcagaatatca
tgcagtttaagatttgaatctgatacttttaatcgcatgttgggaatagataaaactgtc
ccatccttggaagagatagacacacttccagctatatatgctactgtgttaaatttctcg
tcatctgcaccatatgggtcaattccatcctgtcgtataccttttcttcttggtgaacct
tacaataaagatcctgcgtctcaaaatgtctccctaagtattgttcctgttggtgtcaat
gattccagagaagaggaaaaattaaaagctactgttgtagttgatttggaacccagggaa
cccacaccaggtatagttgatgttcacattgaaacaaatgcagaaaatggtcaaatcatc
cacggtcaacttcaaggaatcacagtaggtatagaagacatgtttctcaaggctattgtc
ccatcagacattccagaagatgaaacacctcgatacaactttaacctgttcaatactttg
tgggaggcatgtggctcatcctccagcactggccgggagacctttcagttgaaagggggt
aaagggattgctgccatcggtggaactcaatctgtcaagcttcttgatgtccctgcagcc
tctttgatccaggcaactgagcgccatttggcatgctttgttgtaggtgtgagtggggag
ccacttattgatgctgtatgggaagggggaatcattcaaaatgtcatttgggaagatgct
tctcctgatgccacttctgtttctcatcacgatacaggtccactccgtcttacttacaat
gatgaagagtatgagaaaggggctattagcaataccaggaaaagaaacctaggttgtttt
catgttctaatattccttccaccgcggttccatctccttttccaaatggaagttggagat
gtttcaactttagttcgtatccgtacagatcattggccgagcttagcgtacattgatgat
tatttagaagctttgtatctatcataa
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