Vigna unguiculata (cowpea): 114170727
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Entry
114170727 CDS
T06017
Name
(RefSeq) RNA polymerase sigma factor sigA
KO
K03086
RNA polymerase primary sigma factor
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114170727
Transcription machinery [BR:
vun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
114170727
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
HTH_36
Motif
Other DBs
NCBI-GeneID:
114170727
NCBI-ProteinID:
XP_027912075
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Position
11:complement(40477543..40482370)
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AA seq
506 aa
AA seq
DB search
MASAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTQYQIVSTKSVIVAKKSSNCTPT
FPASNRQNQSIKALKEHVDDAGAATVADPWFQSFSSSDLEVESSEMGYSVEALLLLQKSM
LEKQWSLSFEREVLTERSSKSKIRRKVAAVTCSGVSARQRRMNAKRKTVVKTGGAVQLKS
KISPEPLQNRLKGYVKGVVSEELLSHAEVVILSEKIKVGLSLEEHKSRLKERLGCEPSDD
EIATSLKMSRTELREKMLECSLAREKLAMSNVRLVMSIAQRYENSGAEMGDLVQGGLIGL
LRGIEKFDSSKGFKISTYVYWWIRQGVSKALIENSRTLRLPAHLHERLSLIRNAKFRLEE
RGVTPTIDRIAKHLNMSQKKVRNATEAISKTISLDREAFPSLNGLRGDTHHSYIADNRVE
NIPWKGVDEWALKDEVNKLMNVTLKEREREIIRLYYGLGKECLTWEDISKRMGLSRERVR
QVGLVALEKLKHAARKGELEAMLLKH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgctgcagttattggactcagtggaggaaagaggcttttgagttcatcttac
cattactctgatattatagaaaagctttcttatggaagtgactttggatccacacagtat
cagattgtttcaacaaaatctgtgatagttgccaagaaatcatccaactgcactccaact
tttccggcatcgaaccggcagaatcagtccatcaaggctcttaaggagcatgttgatgat
gctggtgctgctaccgttgcggatccatggtttcagagtttcagttctagtgacttagaa
gtggaaagctcagaaatgggttattctgtggaggctcttcttctgctgcagaagtcaatg
ctggaaaagcaatggagcctttcctttgaaagggaagtgctaacagaacgttctagtaaa
tcgaaaatccgtaggaaagtggcagcggtgacatgttctggagtgtctgcaaggcaaaga
agaatgaatgccaagcggaagactgtggttaaaaccggtggtgctgtgcaactgaagtcc
aaaatcagtccagagcctcttcaaaaccgtttgaagggctatgtgaaaggagtagtgagt
gaggaattgctctctcatgcagaagttgttatcctatcagagaaaataaaagttgggctt
tccttagaggagcataaatccagactgaaggagagactgggatgtgaaccctccgacgat
gaaattgcaacttcattgaagatgtctcgtactgaactacgagaaaaaatgctagagtgc
tctctggcaagagaaaagttggctatgagcaatgttcgcttagttatgtctattgctcag
agatatgaaaactctggtgcagaaatgggtgaccttgttcagggtggcttgattggacta
cttcgtggtattgaaaagtttgattcttcaaaagggtttaagatttcaacttacgtttac
tggtggatacgtcagggtgtttcaaaagccttaattgagaattcaagaacattaagattg
cctgctcatttgcatgagagattatctttaatccgcaatgcaaagtttagactagaagag
agaggcgttactccaactattgataggattgcaaaacaccttaacatgtcccaaaagaaa
gtcagaaatgctactgaggcaatcagcaaaactatctcgcttgatagagaagcatttccc
tctttgaatggcctacgaggagacactcatcatagttacattgcagataatcgcgttgag
aacatcccgtggaagggagtagatgagtgggcactaaaggatgaagtgaacaaactcatg
aatgtgacccttaaggaacgagagagagaaattattcgactttattatggactgggtaaa
gaatgtcttacatgggaagacattagtaaacggatgggtttatcaagagaaagagtaagg
caagttggacttgttgcattggagaaactaaaacatgctgcaaggaagggagaattggag
gcaatgctgttgaaacattaa
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